RNA id: CI01000002_01546448_01547246.mRNA



Basic Information


Item Value
RNA id CI01000002_01546448_01547246.mRNA
length 549
RNA type mRNA
GC content 0.42
exon number 2
gene id CI01000002_01546448_01547246
representative True

Chromosome Information


Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1546448 ~ 1547474 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTGATGGGCTCGCTGGTTCTGGCTGTGGGACTCTGGCTGAGACTAGATCCAAATACTGTGTCACTTTTAGGAGAAGGCGGACCTGAGACCTTCTTTATCGGAAGTGACATTTCAAATTGTGCATACATGGAGGAAACCACAAGACTTCAGGTTTGCTGTAGCAACAGTTCAACCTGGGAGGAGAGAGAGAAAGAGAGAGGTCATGCAATGCTATATCTAGATGCAGAGGAGGGCACTACTTCCATGAAAATATACTTACCCTCCAACAGCCTCCTCCAGCTTGGTTTAGTCAGTGACATCACCCTCATTTGTGGAATTTAGTACTTAAAGCTGTGATGAGAAGCCAATGTGAAAGAGCGTGACTCAAAGTATCAGCAATATTGCAGTGACAAAGTCACATAATAATTTTTCATCAGCTCAGATGAAGAGTTGTAACCCGCACAGTCAGAAAACTGCATGCTCGTTTTAAAGCATCGCTCACACTTTTTGTCACATTAAGATACAAATACAGCCCACATACAATTACATTTATAGACTTACTAAATATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24835 lncRNA upstream 23733 1522422 ~ 1522715 (+) True G22048
TU24809 lncRNA upstream 61132 1485062 ~ 1485316 (+) True G22022
TU24724 lncRNA upstream 112836 1433369 ~ 1433612 (+) True G21946
TU24723 lncRNA upstream 113114 1433125 ~ 1433334 (+) True G21945
TU24721 lncRNA upstream 117056 1428964 ~ 1429392 (+) True G21943
TU24855 lncRNA downstream 39269 1586743 ~ 1646258 (+) True G22067
TU24916 lncRNA downstream 144772 1692246 ~ 1692450 (+) True G22100
TU24917 lncRNA downstream 145448 1692922 ~ 1693394 (+) True G22101
TU24884 lncRNA downstream 299664 1847138 ~ 1849864 (+) True G22081
TU24927 lncRNA downstream 320170 1867644 ~ 1868138 (+) True G22110
CI01000002_01474926_01477596.mRNA mRNA upstream 68535 1474926 ~ 1477913 (+) True CI01000002_01474926_01477596
CI01000002_01257892_01258637.mRNA mRNA upstream 287811 1257717 ~ 1258637 (+) True CI01000002_01257892_01258637
CI01000002_01154239_01172018.mRNA mRNA upstream 373583 1153511 ~ 1172865 (+) True CI01000002_01154239_01172018
CI01000002_01103311_01128430.mRNA mRNA upstream 417643 1103311 ~ 1128805 (+) True CI01000002_01103311_01128430
CI01000002_01047128_01076568.mRNA mRNA upstream 469877 1046968 ~ 1076571 (+) True CI01000002_01047128_01076568
CI01000002_01650177_01674596.mRNA mRNA downstream 102703 1650177 ~ 1674657 (+) True CI01000002_01650177_01674596
CI01000002_01755342_01805760.mRNA mRNA downstream 206994 1754468 ~ 1805772 (+) True CI01000002_01755342_01805760
CI01000002_01821988_01829384.mRNA mRNA downstream 274282 1821756 ~ 1829430 (+) True CI01000002_01821988_01829384
TU24708 other upstream 137391 1387614 ~ 1409057 (+) True G21930
TU23905 other upstream 1020651 523007 ~ 525797 (+) True G21272
TU23885 other upstream 1065993 479147 ~ 480455 (+) True G21254
TU23870 other upstream 1082532 463555 ~ 463916 (+) True G21239

Expression Profile