RNA id: TU24206



Basic Information


Item Value
RNA id TU24206
length 213
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G21552
representative True

Chromosome Information


Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 846446 ~ 846658 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTTAGTAGAAGCACCCTTTTGATCTAATACAGCCATGAGTCTTTTTGGGAAAGATGCAACAAGCTTTTCACACCTGGATTTGGGGATCCTCTGCCATTCCTCCTTGCAGATCCTCTCCAGTTCTGTCAGGTTGGATGGTAAACGTTGGTGGACAGCCATTTTTAGGTCTCTCCAGAGATGCTCAATTGGGTTTAAGTCAGGGCTCTGGCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24053 lncRNA upstream 46496 795277 ~ 799950 (+) True G21415
TU24049 lncRNA upstream 58084 787285 ~ 788362 (+) True G21411
TU24008 lncRNA upstream 168679 677554 ~ 677767 (+) True G21372
TU23902 lncRNA upstream 222127 595037 ~ 624319 (+) True G21269
TU23889 lncRNA upstream 330063 511442 ~ 516383 (+) True G21258
TU24211 lncRNA downstream 3520 850178 ~ 863796 (+) True G21554
TU24219 lncRNA downstream 18039 864697 ~ 865115 (+) True G21561
TU24236 lncRNA downstream 67694 914352 ~ 914569 (+) True G21578
TU24251 lncRNA downstream 90538 937196 ~ 937501 (+) True G21589
TU24253 lncRNA downstream 91993 938651 ~ 940616 (+) True G21591
CI01000002_00772164_00786566.mRNA mRNA upstream 59880 772164 ~ 786566 (+) True CI01000002_00772164_00786566
CI01000002_00738127_00744469.mRNA mRNA upstream 101691 738127 ~ 744755 (+) True CI01000002_00738127_00744469
CI01000002_00718489_00718872.mRNA mRNA upstream 126945 718222 ~ 719501 (+) True CI01000002_00718489_00718872
CI01000002_00699406_00707935.mRNA mRNA upstream 138141 699057 ~ 708305 (+) True CI01000002_00699406_00707935
CI01000002_00470438_00473433.mRNA mRNA upstream 371878 470438 ~ 474568 (+) True CI01000002_00470438_00473433
CI01000002_01017365_01040978.mRNA mRNA downstream 170531 1017189 ~ 1041687 (+) True CI01000002_01017365_01040978
CI01000002_01047128_01076568.mRNA mRNA downstream 200310 1046968 ~ 1076571 (+) True CI01000002_01047128_01076568
CI01000002_01103311_01128430.mRNA mRNA downstream 256653 1103311 ~ 1128805 (+) True CI01000002_01103311_01128430
CI01000002_01154239_01172018.mRNA mRNA downstream 306853 1153511 ~ 1172865 (+) True CI01000002_01154239_01172018
CI01000002_01257892_01258637.mRNA mRNA downstream 411059 1257717 ~ 1258637 (+) True CI01000002_01257892_01258637
TU23905 other upstream 320649 523007 ~ 525797 (+) True G21272
TU23885 other upstream 365991 479147 ~ 480455 (+) True G21254
TU23870 other upstream 382530 463555 ~ 463916 (+) True G21239
TU24708 other downstream 540956 1387614 ~ 1409057 (+) True G21930

Expression Profile