RNA id: TU24251



Basic Information


Item Value
RNA id TU24251
length 306
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G21589
representative True

Chromosome Information


Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 937196 ~ 937501 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TTTGATGAAGTCCGAGGGTATCTGAACCACACATAGGCAGCAACGTCAGTGCACCTTTTGAGGTCAAGAAAGGTAGTTAAAACGTGGTTAAAATGGTCAATGTGACTGCAGTGGTTCAACCTTAATGTTATGAAGCGACGAGAATACTTTTTGTGCGCAAAAACAAAACAAAAATAACAACTTTATTCAACGATTTGAACCGTTGTCATACGTAGTGAACTCAGTGCAGTTCTTTGTTTACGTCCGAACGCCAACTCAGTATTTCATCAAAAATATCTTAATATATGTTCTGTAGATAAACGAAGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24236 lncRNA upstream 22627 914352 ~ 914569 (+) True G21578
TU24219 lncRNA upstream 72081 864697 ~ 865115 (+) True G21561
TU24211 lncRNA upstream 73400 850178 ~ 863796 (+) True G21554
TU24206 lncRNA upstream 90538 846446 ~ 846658 (+) True G21552
TU24053 lncRNA upstream 137246 795277 ~ 799950 (+) True G21415
TU24253 lncRNA downstream 1150 938651 ~ 940616 (+) True G21591
TU24254 lncRNA downstream 4785 942286 ~ 942573 (+) True G21592
TU24255 lncRNA downstream 5933 943434 ~ 943686 (+) True G21593
TU24263 lncRNA downstream 17403 954904 ~ 955193 (+) True G21600
TU24266 lncRNA downstream 21302 958803 ~ 959087 (+) True G21603
CI01000002_00772164_00786566.mRNA mRNA upstream 150630 772164 ~ 786566 (+) True CI01000002_00772164_00786566
CI01000002_00738127_00744469.mRNA mRNA upstream 192441 738127 ~ 744755 (+) True CI01000002_00738127_00744469
CI01000002_00718489_00718872.mRNA mRNA upstream 217695 718222 ~ 719501 (+) True CI01000002_00718489_00718872
CI01000002_00699406_00707935.mRNA mRNA upstream 228891 699057 ~ 708305 (+) True CI01000002_00699406_00707935
CI01000002_00470438_00473433.mRNA mRNA upstream 462628 470438 ~ 474568 (+) True CI01000002_00470438_00473433
CI01000002_01017365_01040978.mRNA mRNA downstream 79688 1017189 ~ 1041687 (+) True CI01000002_01017365_01040978
CI01000002_01047128_01076568.mRNA mRNA downstream 109467 1046968 ~ 1076571 (+) True CI01000002_01047128_01076568
CI01000002_01103311_01128430.mRNA mRNA downstream 165810 1103311 ~ 1128805 (+) True CI01000002_01103311_01128430
CI01000002_01154239_01172018.mRNA mRNA downstream 216010 1153511 ~ 1172865 (+) True CI01000002_01154239_01172018
CI01000002_01257892_01258637.mRNA mRNA downstream 320216 1257717 ~ 1258637 (+) True CI01000002_01257892_01258637
TU23905 other upstream 411399 523007 ~ 525797 (+) True G21272
TU23885 other upstream 456741 479147 ~ 480455 (+) True G21254
TU23870 other upstream 473280 463555 ~ 463916 (+) True G21239
TU24708 other downstream 450113 1387614 ~ 1409057 (+) True G21930

Expression Profile