RNA id: TU24424



Basic Information


Item Value
RNA id TU24424
length 258
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G21714
representative True

Chromosome Information


Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1200817 ~ 1201074 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CAAATGCCAATCTCTATATTTCCTCTTCTTTCTTTTTCTTTTTTTTTTCTTTTTCTTTTTTTTTTTTTTTAATAAACAATGCTATAGGTTATGTGCCTGTATGTGGGTTTTACAAATATTTAACGAATGAAAAGGATTTTAAAGAGCTTGTGACAAAACCTAGTAACTCCATTGGGTCCTCAAACTGTCAGTCAAACCTCATAAATCCGCCCCACCTCCATCGCGAATGAAGTGCCGCACGCGGTTTGGAGATCTCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24423 lncRNA upstream 933 1199676 ~ 1199884 (+) True G21713
TU24398 lncRNA upstream 37936 1162460 ~ 1162881 (+) True G21702
TU24388 lncRNA upstream 56640 1132913 ~ 1144177 (+) False G21697
TU24392 lncRNA upstream 63131 1132913 ~ 1137686 (+) True G21697
TU24363 lncRNA upstream 70376 1129468 ~ 1130441 (+) True G21674
TU24426 lncRNA downstream 3469 1204543 ~ 1204919 (+) True G21716
TU24437 lncRNA downstream 32876 1233950 ~ 1234229 (+) True G21727
TU24438 lncRNA downstream 33501 1234575 ~ 1234788 (+) True G21728
TU24439 lncRNA downstream 34164 1235238 ~ 1235492 (+) True G21729
TU24448 lncRNA downstream 47424 1248498 ~ 1248732 (+) True G21738
CI01000002_01154239_01172018.mRNA mRNA upstream 27952 1153511 ~ 1172865 (+) True CI01000002_01154239_01172018
CI01000002_01103311_01128430.mRNA mRNA upstream 72012 1103311 ~ 1128805 (+) True CI01000002_01103311_01128430
CI01000002_01047128_01076568.mRNA mRNA upstream 124246 1046968 ~ 1076571 (+) True CI01000002_01047128_01076568
CI01000002_01017365_01040978.mRNA mRNA upstream 159130 1017189 ~ 1041687 (+) True CI01000002_01017365_01040978
CI01000002_00772164_00786566.mRNA mRNA upstream 414251 772164 ~ 786566 (+) True CI01000002_00772164_00786566
CI01000002_01257892_01258637.mRNA mRNA downstream 56643 1257717 ~ 1258637 (+) True CI01000002_01257892_01258637
CI01000002_01474926_01477596.mRNA mRNA downstream 273852 1474926 ~ 1477913 (+) True CI01000002_01474926_01477596
CI01000002_01546448_01547246.mRNA mRNA downstream 345374 1546448 ~ 1547474 (+) True CI01000002_01546448_01547246
CI01000002_01650177_01674596.mRNA mRNA downstream 449103 1650177 ~ 1674657 (+) True CI01000002_01650177_01674596
CI01000002_01755342_01805760.mRNA mRNA downstream 553394 1754468 ~ 1805772 (+) True CI01000002_01755342_01805760
TU23905 other upstream 675020 523007 ~ 525797 (+) True G21272
TU23885 other upstream 720362 479147 ~ 480455 (+) True G21254
TU23870 other upstream 736901 463555 ~ 463916 (+) True G21239
TU24708 other downstream 186540 1387614 ~ 1409057 (+) True G21930

Expression Profile