RNA id: TU24916



Basic Information


Item Value
RNA id TU24916
length 205
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G22100
representative True

Chromosome Information


Item Value
chromosome id CI01000002
NCBI id null
chromosome length 1907571
location 1692246 ~ 1692450 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTAAATCGAAAACAAAAATTCTGTTTATGTAATCTGTATGAAAAGAGACACATGTCAGAAGTCCGTGATTCAGCTCATTATCCGCTAATGCGGCCACGCCCACGGAGCGAGCGCTATTCAGACGCAAATTCTGAGGCAATACATGTATACATCGTCGCAATCATGTATTTATTGTCTTGAAAAGTGTTTATCTGTATGTTAAAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU24855 lncRNA upstream 45988 1586743 ~ 1646258 (+) True G22067
TU24835 lncRNA upstream 169531 1522422 ~ 1522715 (+) True G22048
TU24809 lncRNA upstream 206930 1485062 ~ 1485316 (+) True G22022
TU24724 lncRNA upstream 258634 1433369 ~ 1433612 (+) True G21946
TU24723 lncRNA upstream 258912 1433125 ~ 1433334 (+) True G21945
TU24917 lncRNA downstream 472 1692922 ~ 1693394 (+) True G22101
TU24884 lncRNA downstream 154688 1847138 ~ 1849864 (+) True G22081
TU24927 lncRNA downstream 175194 1867644 ~ 1868138 (+) True G22110
TU24929 lncRNA downstream 185479 1877929 ~ 1879570 (+) True G22112
TU24930 lncRNA downstream 187979 1880429 ~ 1880761 (+) True G22113
CI01000002_01650177_01674596.mRNA mRNA upstream 17589 1650177 ~ 1674657 (+) True CI01000002_01650177_01674596
CI01000002_01546448_01547246.mRNA mRNA upstream 144772 1546448 ~ 1547474 (+) True CI01000002_01546448_01547246
CI01000002_01474926_01477596.mRNA mRNA upstream 214333 1474926 ~ 1477913 (+) True CI01000002_01474926_01477596
CI01000002_01257892_01258637.mRNA mRNA upstream 433609 1257717 ~ 1258637 (+) True CI01000002_01257892_01258637
CI01000002_01154239_01172018.mRNA mRNA upstream 519381 1153511 ~ 1172865 (+) True CI01000002_01154239_01172018
CI01000002_01755342_01805760.mRNA mRNA downstream 62018 1754468 ~ 1805772 (+) True CI01000002_01755342_01805760
CI01000002_01821988_01829384.mRNA mRNA downstream 129306 1821756 ~ 1829430 (+) True CI01000002_01821988_01829384
TU24708 other upstream 283189 1387614 ~ 1409057 (+) True G21930
TU23905 other upstream 1166449 523007 ~ 525797 (+) True G21272
TU23885 other upstream 1211791 479147 ~ 480455 (+) True G21254
TU23870 other upstream 1228330 463555 ~ 463916 (+) True G21239

Expression Profile