Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU25360 |
| length | 1396 |
| RNA type | TUCP |
| GC content | 0.38 |
| exon number | 6 |
| gene id | CI01000003_00390997_00406970 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000003 |
| NCBI id | null |
| chromosome length | 2831192 |
| location | 390622 ~ 408312 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0006379 | mRNA cleavage | biological_process |
| id | description |
|---|---|
| K15542 | PFS2; polyadenylation factor subunit 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU25397 | lncRNA | upstream | 101 | 390622 ~ 390912 (+) | False | CI01000003_00390997_00406970 |
| TU25391 | lncRNA | upstream | 18194 | 372551 ~ 372819 (+) | True | G22506 |
| TU25386 | lncRNA | upstream | 34199 | 356555 ~ 356814 (+) | True | G22501 |
| TU25281 | lncRNA | upstream | 65491 | 324681 ~ 325522 (+) | True | G22419 |
| TU25355 | lncRNA | upstream | 73989 | 316746 ~ 317024 (+) | True | G22484 |
| TU25370 | lncRNA | downstream | 15349 | 410563 ~ 411612 (+) | False | G22488 |
| TU25369 | lncRNA | downstream | 15546 | 410760 ~ 411612 (+) | True | G22488 |
| TU25373 | lncRNA | downstream | 55334 | 450548 ~ 451101 (+) | True | G22490 |
| TU25409 | lncRNA | downstream | 73459 | 468673 ~ 468902 (+) | True | G22524 |
| TU25429 | lncRNA | downstream | 126935 | 522149 ~ 522653 (+) | True | G22544 |
| CI01000003_00380494_00385991.mRNA | mRNA | upstream | 4922 | 380494 ~ 386091 (+) | True | CI01000003_00380494_00385991 |
| CI01000003_00355244_00360638.mRNA | mRNA | upstream | 30220 | 355244 ~ 360793 (+) | True | CI01000003_00355244_00360638 |
| CI01000003_00323130_00336023.mRNA | mRNA | upstream | 54845 | 322867 ~ 336168 (+) | True | CI01000003_00323130_00336023 |
| CI01000003_00266342_00275005.mRNA | mRNA | upstream | 115701 | 266342 ~ 275312 (+) | False | CI01000003_00266342_00275005 |
| CI01000003_00157111_00159800.mRNA | mRNA | upstream | 230769 | 156863 ~ 160244 (+) | True | CI01000003_00157111_00159800 |
| CI01000003_00413809_00414819.mRNA | mRNA | downstream | 17376 | 412590 ~ 415156 (+) | True | CI01000003_00413809_00414819 |
| CI01000003_00431473_00447759.mRNA | mRNA | downstream | 36259 | 431473 ~ 447950 (+) | True | CI01000003_00431473_00447759 |
| CI01000003_00538178_00547944.mRNA | mRNA | downstream | 142871 | 538085 ~ 547983 (+) | True | CI01000003_00538178_00547944 |
| CI01000003_00568546_00573291.mRNA | mRNA | downstream | 173332 | 568546 ~ 573869 (+) | True | CI01000003_00568546_00573291 |
| CI01000003_00596144_00607951.mRNA | mRNA | downstream | 200930 | 596144 ~ 608038 (+) | True | CI01000003_00596144_00607951 |
| TU25282 | other | upstream | 201574 | 179531 ~ 189439 (+) | True | G22420 |
| TU25485 | other | downstream | 529589 | 924803 ~ 925248 (+) | True | G22578 |
| TU26311 | other | downstream | 1468054 | 1863892 ~ 1866921 (+) | False | G23315 |
| TU26312 | other | downstream | 1468054 | 1864690 ~ 1866921 (+) | True | G23315 |
| TU26310 | other | downstream | 1469394 | 1864608 ~ 1866921 (+) | True | G23315 |
| TU26952 | other | downstream | 1885446 | 2280660 ~ 2285641 (+) | True | G23870 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031809 | True | 1386 | mRNA | 0.47 | 6 | NC_007113.7 | 5434948 ~ 5443672 (-) |
| eurasian perch (Perca fluviatilis) | TU149748 | False | 498 | lncRNA | 0.55 | 2 | NC_053122.1 | 1152134 ~ 1154135 (-) |
