Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000003_00538178_00547944.mRNA |
| length | 1203 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 10 |
| gene id | CI01000003_00538178_00547944 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000003 |
| NCBI id | null |
| chromosome length | 2831192 |
| location | 538085 ~ 547983 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0008022 | protein C-terminus binding | molecular_function |
| id | description |
|---|---|
| K17081 | PHB2; prohibitin 2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU25429 | lncRNA | upstream | 15432 | 522149 ~ 522653 (+) | True | G22544 |
| TU25409 | lncRNA | upstream | 69183 | 468673 ~ 468902 (+) | True | G22524 |
| TU25373 | lncRNA | upstream | 86984 | 450548 ~ 451101 (+) | True | G22490 |
| TU25370 | lncRNA | upstream | 126473 | 410563 ~ 411612 (+) | False | G22488 |
| TU25369 | lncRNA | upstream | 126473 | 410760 ~ 411612 (+) | True | G22488 |
| TU25438 | lncRNA | downstream | 12937 | 560920 ~ 561612 (+) | True | G22551 |
| TU25492 | lncRNA | downstream | 34085 | 582068 ~ 582405 (+) | True | G22585 |
| TU25490 | lncRNA | downstream | 196698 | 744681 ~ 744938 (+) | True | G22583 |
| TU25481 | lncRNA | downstream | 269815 | 817798 ~ 819540 (+) | True | G22574 |
| TU25508 | lncRNA | downstream | 331648 | 879631 ~ 879868 (+) | True | G22601 |
| CI01000003_00431473_00447759.mRNA | mRNA | upstream | 90135 | 431473 ~ 447950 (+) | True | CI01000003_00431473_00447759 |
| CI01000003_00413809_00414819.mRNA | mRNA | upstream | 122929 | 412590 ~ 415156 (+) | True | CI01000003_00413809_00414819 |
| CI01000003_00390997_00406970.mRNA | mRNA | upstream | 129773 | 390897 ~ 408312 (+) | False | CI01000003_00390997_00406970 |
| CI01000003_00380494_00385991.mRNA | mRNA | upstream | 151994 | 380494 ~ 386091 (+) | True | CI01000003_00380494_00385991 |
| CI01000003_00355244_00360638.mRNA | mRNA | upstream | 177292 | 355244 ~ 360793 (+) | True | CI01000003_00355244_00360638 |
| CI01000003_00568546_00573291.mRNA | mRNA | downstream | 20563 | 568546 ~ 573869 (+) | True | CI01000003_00568546_00573291 |
| CI01000003_00596144_00607951.mRNA | mRNA | downstream | 48161 | 596144 ~ 608038 (+) | True | CI01000003_00596144_00607951 |
| CI01000003_00644619_00663181.mRNA | mRNA | downstream | 95672 | 643655 ~ 663280 (+) | True | CI01000003_00644619_00663181 |
| CI01000003_00665762_00716862.mRNA | mRNA | downstream | 116978 | 664961 ~ 717379 (+) | True | CI01000003_00665762_00716862 |
| CI01000003_00731635_00742538.mRNA | mRNA | downstream | 183217 | 731200 ~ 742609 (+) | True | CI01000003_00731635_00742538 |
| TU25360 | other | upstream | 142871 | 391013 ~ 395214 (+) | True | CI01000003_00390997_00406970 |
| TU25282 | other | upstream | 348646 | 179531 ~ 189439 (+) | True | G22420 |
| TU25485 | other | downstream | 376820 | 924803 ~ 925248 (+) | True | G22578 |
| TU26311 | other | downstream | 1315285 | 1863892 ~ 1866921 (+) | False | G23315 |
| TU26312 | other | downstream | 1315285 | 1864690 ~ 1866921 (+) | True | G23315 |
| TU26310 | other | downstream | 1316625 | 1864608 ~ 1866921 (+) | True | G23315 |
| TU26952 | other | downstream | 1732677 | 2280660 ~ 2285641 (+) | True | G23870 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031803 | True | 1332 | mRNA | 0.47 | 10 | NC_007113.7 | 5178172 ~ 5199431 (-) |
