Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_01426795_01429440.mRNA |
| length | 459 |
| RNA type | mRNA |
| GC content | 0.48 |
| exon number | 4 |
| gene id | CI01000004_01426795_01429440 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 1426795 ~ 1429440 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0034399 | nuclear periphery | cellular_component |
| id | description |
|---|---|
| K14823 | EBP2, EBNA1BP2; rRNA-processing protein EBP2 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28366 | lncRNA | upstream | 115204 | 1311043 ~ 1311591 (+) | True | G25143 |
| TU28351 | lncRNA | upstream | 136117 | 1290222 ~ 1290678 (+) | True | G25129 |
| TU28283 | lncRNA | upstream | 190401 | 1231735 ~ 1231938 (+) | True | G25063 |
| TU28296 | lncRNA | upstream | 266365 | 1140627 ~ 1160430 (+) | True | G25076 |
| TU28310 | lncRNA | upstream | 294218 | 1132293 ~ 1132577 (+) | True | G25089 |
| TU28452 | lncRNA | downstream | 15625 | 1445065 ~ 1445396 (+) | True | G25222 |
| TU28431 | lncRNA | downstream | 29893 | 1465948 ~ 1489877 (+) | True | G25201 |
| TU28456 | lncRNA | downstream | 141179 | 1570619 ~ 1570878 (+) | True | G25226 |
| TU28422 | lncRNA | downstream | 155826 | 1585266 ~ 1585620 (+) | True | G25192 |
| TU28472 | lncRNA | downstream | 274817 | 1704257 ~ 1704558 (+) | True | G25242 |
| CI01000004_01377802_01389208.mRNA | mRNA | upstream | 37380 | 1377685 ~ 1389415 (+) | True | CI01000004_01377802_01389208 |
| CI01000004_01332533_01345585.mRNA | mRNA | upstream | 80787 | 1331583 ~ 1346008 (+) | False | CI01000004_01332533_01345585 |
| CI01000004_01321057_01329157.mRNA | mRNA | upstream | 97638 | 1321057 ~ 1329157 (+) | True | CI01000004_01321057_01329157 |
| CI01000004_01305065_01310559.mRNA | mRNA | upstream | 116236 | 1305065 ~ 1310559 (+) | True | CI01000004_01305065_01310559 |
| CI01000004_01302094_01304391.mRNA | mRNA | upstream | 122131 | 1301149 ~ 1304664 (+) | True | CI01000004_01302094_01304391 |
| CI01000004_01446583_01461259.mRNA | mRNA | downstream | 16763 | 1446203 ~ 1461916 (+) | False | CI01000004_01446583_01461259 |
| CI01000004_01501609_01545725.mRNA | mRNA | downstream | 72169 | 1501609 ~ 1546119 (+) | True | CI01000004_01501609_01545725 |
| CI01000004_01578642_01584658.mRNA | mRNA | downstream | 149126 | 1578566 ~ 1584808 (+) | True | CI01000004_01578642_01584658 |
| CI01000004_01592461_01602968.mRNA | mRNA | downstream | 162916 | 1592356 ~ 1602968 (+) | True | CI01000004_01592461_01602968 |
| CI01000004_01623427_01625278.mRNA | mRNA | downstream | 193987 | 1623427 ~ 1625340 (+) | True | CI01000004_01623427_01625278 |
| TU28341 | other | upstream | 78621 | 1347470 ~ 1348174 (+) | True | G25120 |
| TU28378 | other | upstream | 92806 | 1332465 ~ 1333989 (+) | False | CI01000004_01332533_01345585 |
| TU27514 | other | upstream | 954949 | 467843 ~ 471846 (+) | True | CI01000004_00467911_00469949 |
| TU28416 | other | downstream | 175102 | 1604542 ~ 1616470 (+) | True | G25187 |
| TU28515 | other | downstream | 434719 | 1864159 ~ 1873358 (+) | True | G25282 |
| TU28564 | other | downstream | 653617 | 2083057 ~ 2085707 (+) | True | G25329 |
| TU29214 | other | downstream | 1118635 | 2548075 ~ 2573049 (+) | True | G25882 |
| TU29329 | other | downstream | 1307096 | 2736536 ~ 2736768 (+) | True | G25992 |
