Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU28515 |
| length | 2679 |
| RNA type | TUCP |
| GC content | 0.41 |
| exon number | 3 |
| gene id | G25282 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 1864159 ~ 1873358 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28484 | lncRNA | upstream | 93455 | 1770395 ~ 1770704 (+) | True | G25254 |
| TU28483 | lncRNA | upstream | 93982 | 1769825 ~ 1770177 (+) | True | G25253 |
| TU28478 | lncRNA | upstream | 101896 | 1760530 ~ 1762263 (+) | True | G25248 |
| TU28479 | lncRNA | upstream | 104937 | 1757912 ~ 1759222 (+) | True | G25249 |
| TU28472 | lncRNA | upstream | 159601 | 1704257 ~ 1704558 (+) | True | G25242 |
| TU28572 | lncRNA | downstream | 72568 | 1945926 ~ 1950133 (+) | True | G25337 |
| TU28579 | lncRNA | downstream | 82027 | 1955385 ~ 1955605 (+) | True | G25344 |
| TU28580 | lncRNA | downstream | 82784 | 1956142 ~ 1956492 (+) | True | G25345 |
| TU28559 | lncRNA | downstream | 83284 | 1956642 ~ 1957261 (+) | True | G25324 |
| TU28540 | lncRNA | downstream | 85295 | 1958653 ~ 1959840 (+) | True | G25305 |
| CI01000004_01855598_01856473.mRNA | mRNA | upstream | 7635 | 1855351 ~ 1856524 (+) | True | CI01000004_01855598_01856473 |
| CI01000004_01823571_01825813.mRNA | mRNA | upstream | 37393 | 1823571 ~ 1826766 (+) | True | CI01000004_01823571_01825813 |
| CI01000004_01800502_01807872.mRNA | mRNA | upstream | 55307 | 1800502 ~ 1808852 (+) | True | CI01000004_01800502_01807872 |
| CI01000004_01757017_01757201.mRNA | mRNA | upstream | 106295 | 1757017 ~ 1757864 (+) | False | CI01000004_01757017_01757201 |
| CI01000004_01750322_01754593.mRNA | mRNA | upstream | 108836 | 1750322 ~ 1755323 (+) | True | CI01000004_01750322_01754593 |
| CI01000004_01883020_01908403.mRNA | mRNA | downstream | 9662 | 1883020 ~ 1908634 (+) | True | CI01000004_01883020_01908403 |
| CI01000004_01917089_01920203.mRNA | mRNA | downstream | 42268 | 1915626 ~ 1920705 (+) | True | CI01000004_01917089_01920203 |
| CI01000004_01937296_01943730.mRNA | mRNA | downstream | 63938 | 1937296 ~ 1943730 (+) | True | CI01000004_01937296_01943730 |
| CI01000004_01961480_01979407.mRNA | mRNA | downstream | 86697 | 1960055 ~ 1979465 (+) | False | CI01000004_01961480_01979407 |
| CI01000004_01999847_02001406.mRNA | mRNA | downstream | 126489 | 1999847 ~ 2002779 (+) | True | CI01000004_01999847_02001406 |
| TU28416 | other | upstream | 247689 | 1604542 ~ 1616470 (+) | True | G25187 |
| TU28341 | other | upstream | 515985 | 1347470 ~ 1348174 (+) | True | G25120 |
| TU28378 | other | upstream | 530170 | 1332465 ~ 1333989 (+) | False | CI01000004_01332533_01345585 |
| TU27514 | other | upstream | 1392313 | 467843 ~ 471846 (+) | True | CI01000004_00467911_00469949 |
| TU28564 | other | downstream | 209699 | 2083057 ~ 2085707 (+) | True | G25329 |
| TU29214 | other | downstream | 674717 | 2548075 ~ 2573049 (+) | True | G25882 |
| TU29329 | other | downstream | 863178 | 2736536 ~ 2736768 (+) | True | G25992 |
| TU29335 | other | downstream | 885098 | 2758456 ~ 2758938 (+) | True | CI01000004_02745885_02768971 |
| TU29632 | other | downstream | 1635659 | 3509017 ~ 3522393 (+) | True | G26245 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031928 | False | 1691 | mRNA | 0.44 | 6 | NC_007113.7 | 9958081 ~ 9971728 (-) |
| mexican tetra (Astyanax mexicanus) | TU187245 | False | 2223 | TUCP | 0.45 | 6 | NC_035912.1 | 2478781 ~ 2486751 (-) |
