Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_02116310_02120268.mRNA |
| length | 1197 |
| RNA type | mRNA |
| GC content | 0.41 |
| exon number | 6 |
| gene id | CI01000004_02116310_02120268 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 2115937 ~ 2120360 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0007033 | vacuole organization | biological_process |
| id | description |
|---|---|
| K12196 | VPS4; vacuolar protein-sorting-associated protein 4 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU28567 | lncRNA | upstream | 34495 | 2074919 ~ 2081442 (+) | True | G25332 |
| TU28547 | lncRNA | upstream | 41856 | 2073722 ~ 2074081 (+) | True | CI01000004_02068075_02072887 |
| TU28565 | lncRNA | upstream | 42451 | 2073278 ~ 2073486 (+) | False | CI01000004_02068075_02072887 |
| TU28532 | lncRNA | upstream | 88145 | 1978730 ~ 2027792 (+) | True | G25297 |
| TU28540 | lncRNA | upstream | 154878 | 1958653 ~ 1959840 (+) | True | G25305 |
| TU28560 | lncRNA | downstream | 18558 | 2138918 ~ 2139139 (+) | True | G25325 |
| TU28536 | lncRNA | downstream | 19018 | 2139378 ~ 2140889 (+) | True | G25301 |
| TU28609 | lncRNA | downstream | 71829 | 2192189 ~ 2192405 (+) | True | G25372 |
| TU28543 | lncRNA | downstream | 74047 | 2194407 ~ 2195224 (+) | True | G25308 |
| TU28545 | lncRNA | downstream | 117666 | 2238026 ~ 2240157 (+) | True | G25310 |
| CI01000004_02068075_02072887.mRNA | mRNA | upstream | 41876 | 2067958 ~ 2074061 (+) | False | CI01000004_02068075_02072887 |
| CI01000004_02033826_02057420.mRNA | mRNA | upstream | 58284 | 2033003 ~ 2057653 (+) | True | CI01000004_02033826_02057420 |
| CI01000004_02014703_02018248.mRNA | mRNA | upstream | 97471 | 2014600 ~ 2018466 (+) | True | CI01000004_02014703_02018248 |
| CI01000004_02004004_02012588.mRNA | mRNA | upstream | 102523 | 2002871 ~ 2013414 (+) | True | CI01000004_02004004_02012588 |
| CI01000004_01999847_02001406.mRNA | mRNA | upstream | 113158 | 1999847 ~ 2002779 (+) | True | CI01000004_01999847_02001406 |
| CI01000004_02126757_02136937.mRNA | mRNA | downstream | 6106 | 2126466 ~ 2137348 (+) | True | CI01000004_02126757_02136937 |
| CI01000004_02143355_02186281.mRNA | mRNA | downstream | 22316 | 2142676 ~ 2186771 (+) | True | CI01000004_02143355_02186281 |
| CI01000004_02528689_02568243.mRNA | mRNA | downstream | 408329 | 2528689 ~ 2569227 (+) | True | CI01000004_02528689_02568243 |
| CI01000004_02671199_02727898.mRNA | mRNA | downstream | 550839 | 2671199 ~ 2728328 (+) | True | CI01000004_02671199_02727898 |
| CI01000004_02745885_02768971.mRNA | mRNA | downstream | 625525 | 2745885 ~ 2769135 (+) | False | CI01000004_02745885_02768971 |
| TU28564 | other | upstream | 30230 | 2083057 ~ 2085707 (+) | True | G25329 |
| TU28515 | other | upstream | 242579 | 1864159 ~ 1873358 (+) | True | G25282 |
| TU28416 | other | upstream | 499467 | 1604542 ~ 1616470 (+) | True | G25187 |
| TU28341 | other | upstream | 767763 | 1347470 ~ 1348174 (+) | True | G25120 |
| TU28378 | other | upstream | 781948 | 1332465 ~ 1333989 (+) | False | CI01000004_01332533_01345585 |
| TU29214 | other | downstream | 427715 | 2548075 ~ 2573049 (+) | True | G25882 |
| TU29329 | other | downstream | 616176 | 2736536 ~ 2736768 (+) | True | G25992 |
| TU29335 | other | downstream | 638096 | 2758456 ~ 2758938 (+) | True | CI01000004_02745885_02768971 |
| TU29632 | other | downstream | 1388657 | 3509017 ~ 3522393 (+) | True | G26245 |
| TU29692 | other | downstream | 1430688 | 3551048 ~ 3552446 (+) | True | CI01000004_03550525_03552621 |
