RNA id: TCONS_00013061


Basic Information

Item Value
RNA id TCONS_00013061
length 425
RNA type mRNA
GC content 0.44
exon number 4
gene id XLOC_006788
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 35984621 ~ 35985772 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GAAGGCTTAAATTTCGTCAGGTGTGATCGGGATTGGGTCTCTGCTGTTGATCAGCCGAGCTTCTTAAACCAACAACAGGTCACAACAATCTCAGTTCATTCAGGAGTTTACTGTGATTTACGTTGCCAGCCGTAGAGGATCGTTGAACCTGTTGCGTCTCTCCTAAAGTCTCTTCGGAGTGACCTTCTGAAGATTTGAGAAGTCCTGAAGGTCTAGTCATTGACTCAGTCTTCTGAAAGATTTCAGTCCTCATTTCGAGATGTGAAGCGATGAAGCGATCAGTAAAGCAATGAGCATGATGAAGTTCACTTGCTGTCTGTATTACTACATGAACCTGCTTAAACATCAACCAAGGTGTCTCCTCCTTATTGGAGTGTCATGCTTCACTCAGTTTGAGATTGTTGTCCCTAGAGATCTTGTCATTG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000137297

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013872 lncRNA downstream 59137 35925042 ~ 35925484 (-) True XLOC_006784
TCONS_00013044 lncRNA downstream 457216 35520974 ~ 35527405 (-) True XLOC_006778
TCONS_00013869 lncRNA downstream 695184 35205297 ~ 35289437 (-) False XLOC_006774
TCONS_00013080 lncRNA upstream 335592 36321364 ~ 36322604 (-) False XLOC_006796
TCONS_00013088 lncRNA upstream 544458 36530230 ~ 36535072 (-) False XLOC_006800
TCONS_00013091 lncRNA upstream 545788 36531560 ~ 36532726 (-) False XLOC_006800
TCONS_00013096 lncRNA upstream 583175 36568947 ~ 36582281 (-) False XLOC_006803
TCONS_00013099 lncRNA upstream 601998 36587770 ~ 36612159 (-) True XLOC_006804
TCONS_00013060 mRNA downstream 91 35983997 ~ 35984530 (-) True XLOC_006787
TCONS_00013059 mRNA downstream 7635 35974362 ~ 35976986 (-) True XLOC_006786
TCONS_00013056 mRNA downstream 76346 35904335 ~ 35908275 (-) False XLOC_006783
TCONS_00013057 mRNA downstream 76853 35906948 ~ 35907768 (-) True XLOC_006783
TCONS_00013054 mRNA downstream 92378 35889149 ~ 35892243 (-) False XLOC_006782
TCONS_00013062 mRNA upstream 9466 35995238 ~ 36034582 (-) True XLOC_006789
TCONS_00013063 mRNA upstream 52198 36037970 ~ 36049008 (-) False XLOC_006790
TCONS_00013064 mRNA upstream 53904 36039676 ~ 36050327 (-) False XLOC_006790
TCONS_00013065 mRNA upstream 59549 36045321 ~ 36050303 (-) True XLOC_006790
TCONS_00013066 mRNA upstream 68213 36053985 ~ 36134401 (-) False XLOC_006791
TCONS_00013058 other downstream 22155 35962350 ~ 35962466 (-) True XLOC_006785
TCONS_00013051 other downstream 142032 35826667 ~ 35842589 (-) True XLOC_006781
TCONS_00013045 other downstream 392244 35592242 ~ 35592377 (-) True XLOC_006779
TCONS_00013041 other downstream 524690 35430544 ~ 35459931 (-) True XLOC_006776
TCONS_00013038 other downstream 613937 35370569 ~ 35370684 (-) True XLOC_006775
TCONS_00013072 other upstream 149644 36135416 ~ 36141351 (-) True XLOC_006792
TCONS_00013079 other upstream 335319 36321091 ~ 36391491 (-) False XLOC_006796
TCONS_00013081 other upstream 335659 36321431 ~ 36330899 (-) True XLOC_006796
TCONS_00013082 other upstream 413488 36399260 ~ 36399375 (-) True XLOC_006797
TCONS_00013090 other upstream 544648 36530420 ~ 36535072 (-) False XLOC_006800

Expression Profile

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