Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU35243 |
| length | 3083 |
| lncRNA type | sense_over |
| GC content | 0.38 |
| exon number | 1 |
| gene id | CI01000004_10692864_10704094 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 10692637 ~ 10704094 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0050960 | detection of temperature stimulus involved in thermoception | biological_process |
| id | description |
|---|---|
| K04984 | TRPA1, ANKTM1; transient receptor potential cation channel subfamily A member 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU35250 | lncRNA | downstream | 93 | 10693367 ~ 10693734 (-) | True | G31145 |
| TU35253 | lncRNA | downstream | 12820 | 10676417 ~ 10681007 (-) | True | G31148 |
| TU35298 | lncRNA | downstream | 22983 | 10670441 ~ 10670844 (-) | True | G31190 |
| TU35294 | lncRNA | downstream | 26692 | 10666929 ~ 10667135 (-) | True | G31186 |
| TU35292 | lncRNA | downstream | 28668 | 10664784 ~ 10665159 (-) | True | G31184 |
| TU35304 | lncRNA | upstream | 15377 | 10712286 ~ 10712931 (-) | True | G31196 |
| TU35308 | lncRNA | upstream | 30003 | 10726912 ~ 10727142 (-) | True | G31200 |
| TU35314 | lncRNA | upstream | 53940 | 10750849 ~ 10752367 (-) | True | G31204 |
| TU35318 | lncRNA | upstream | 58320 | 10755229 ~ 10755530 (-) | True | G31206 |
| TU35331 | lncRNA | upstream | 75416 | 10772325 ~ 10772526 (-) | True | G31212 |
| CI01000004_10619819_10627261.mRNA | mRNA | downstream | 66566 | 10619019 ~ 10627261 (-) | True | CI01000004_10619819_10627261 |
| CI01000004_10553379_10573352.mRNA | mRNA | downstream | 118584 | 10553037 ~ 10575243 (-) | True | CI01000004_10553379_10573352 |
| CI01000004_10458668_10465442.mRNA | mRNA | downstream | 228124 | 10458662 ~ 10465703 (-) | True | CI01000004_10458668_10465442 |
| CI01000004_10436514_10438365.mRNA | mRNA | downstream | 254368 | 10436499 ~ 10439459 (-) | True | CI01000004_10436514_10438365 |
| CI01000004_10290550_10295288.mRNA | mRNA | downstream | 398470 | 10289863 ~ 10295357 (-) | True | CI01000004_10290550_10295288 |
| CI01000004_10757852_10760211.mRNA | mRNA | upstream | 60634 | 10757543 ~ 10761142 (-) | True | CI01000004_10757852_10760211 |
| CI01000004_10766385_10766860.mRNA | mRNA | upstream | 69431 | 10766340 ~ 10766860 (-) | True | CI01000004_10766385_10766860 |
| CI01000004_10788659_10809214.mRNA | mRNA | upstream | 91750 | 10788659 ~ 10809805 (-) | True | CI01000004_10788659_10809214 |
| CI01000004_10847650_10847940.mRNA | mRNA | upstream | 150648 | 10847557 ~ 10847995 (-) | True | CI01000004_10847650_10847940 |
| CI01000004_10884499_10886045.mRNA | mRNA | upstream | 187517 | 10884426 ~ 10886045 (-) | True | CI01000004_10884499_10886045 |
| TU34309 | other | downstream | 1286906 | 9377937 ~ 9406921 (-) | True | G30316 |
| TU33669 | other | downstream | 2335700 | 8354498 ~ 8358127 (-) | False | G29746 |
| TU33670 | other | downstream | 2335700 | 8354498 ~ 8358127 (-) | True | G29746 |
| TU33567 | other | downstream | 2728327 | 7964364 ~ 7965500 (-) | True | G29656 |
| TU33263 | other | downstream | 4061920 | 6631293 ~ 6631907 (-) | True | G29388 |
| TU35313 | other | upstream | 49528 | 10746437 ~ 10750641 (-) | True | G31203 |
| TU36279 | other | upstream | 710556 | 11407465 ~ 11412907 (-) | True | CI01000004_11407198_11412220 |
| TU36455 | other | upstream | 1079610 | 11776519 ~ 11780951 (-) | True | G32150 |
| TU36531 | other | upstream | 1679259 | 12376168 ~ 12384780 (-) | True | G32207 |
| TU38237 | other | upstream | 3853891 | 14550800 ~ 14551284 (-) | True | CI01000004_14543631_14551256 |
