Gene
RNA
| Item | Value |
|---|---|
| RNA id | TCONS_00013074 |
| length | 879 |
| RNA type | mRNA |
| GC content | 0.60 |
| exon number | 4 |
| gene id | XLOC_006793 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_007124.7 |
| NCBI id | CM002897.2 |
| chromosome length | 52186027 |
| location | 36164639 ~ 36184701 (-) |
| genome version | GRCz11_2017_zebrafish_Genome |
| species | zebrafish (Danio rerio) |
| id | name | namespace |
|---|---|---|
| GO:0007257 | activation of JUN kinase activity | biological_process |
| GO:0006468 | protein phosphorylation | biological_process |
| GO:0016310 | phosphorylation | biological_process |
| GO:0016740 | transferase activity | molecular_function |
| GO:0005524 | ATP binding | molecular_function |
| GO:0000166 | nucleotide binding | molecular_function |
| GO:0004672 | protein kinase activity | molecular_function |
| GO:0004674 | protein serine/threonine kinase activity | molecular_function |
| GO:0016301 | kinase activity | molecular_function |
| GO:0004706 | JUN kinase kinase kinase activity | molecular_function |
| id | description |
|---|---|
| ko04013 | MAPK signaling pathway - fly |
| ko04361 | Axon regeneration |
| ko01001 | Protein kinases |
| id | description |
|---|---|
| ZDB-GENE-081113-5 | Predicted to enable JUN kinase kinase kinase activity. Predicted to act upstream of or within protein phosphorylation. Orthologous to human MAP3K9 (mitogen-activated protein kinase kinase kinase 9). |
| ensembl_id | ENSDART00000057185 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TCONS_00013872 | lncRNA | downstream | 250288 | 35925042 ~ 35925484 (-) | True | XLOC_006784 |
| TCONS_00013044 | lncRNA | downstream | 648367 | 35520974 ~ 35527405 (-) | True | XLOC_006778 |
| TCONS_00013869 | lncRNA | downstream | 886335 | 35205297 ~ 35289437 (-) | False | XLOC_006774 |
| TCONS_00013080 | lncRNA | upstream | 136888 | 36321364 ~ 36322604 (-) | False | XLOC_006796 |
| TCONS_00013088 | lncRNA | upstream | 345754 | 36530230 ~ 36535072 (-) | False | XLOC_006800 |
| TCONS_00013091 | lncRNA | upstream | 347084 | 36531560 ~ 36532726 (-) | False | XLOC_006800 |
| TCONS_00013096 | lncRNA | upstream | 384471 | 36568947 ~ 36582281 (-) | False | XLOC_006803 |
| TCONS_00013099 | lncRNA | upstream | 403294 | 36587770 ~ 36612159 (-) | True | XLOC_006804 |
| TCONS_00013071 | mRNA | downstream | 34286 | 36135122 ~ 36141486 (-) | False | XLOC_006792 |
| TCONS_00013070 | mRNA | downstream | 41455 | 36054929 ~ 36134317 (-) | False | XLOC_006791 |
| TCONS_00013075 | mRNA | upstream | 12302 | 36196778 ~ 36264861 (-) | True | XLOC_006794 |
| TCONS_00013076 | mRNA | upstream | 127418 | 36311894 ~ 36319308 (-) | True | XLOC_006795 |
| TCONS_00013077 | mRNA | upstream | 136612 | 36321088 ~ 36391496 (-) | False | XLOC_006796 |
| TCONS_00013078 | mRNA | upstream | 136612 | 36321088 ~ 36391502 (-) | False | XLOC_006796 |
| TCONS_00013083 | mRNA | upstream | 221798 | 36406274 ~ 36439061 (-) | False | XLOC_006798 |
| TCONS_00013072 | other | downstream | 34421 | 36135416 ~ 36141351 (-) | True | XLOC_006792 |
| TCONS_00013058 | other | downstream | 213306 | 35962350 ~ 35962466 (-) | True | XLOC_006785 |
| TCONS_00013051 | other | downstream | 333183 | 35826667 ~ 35842589 (-) | True | XLOC_006781 |
| TCONS_00013045 | other | downstream | 583395 | 35592242 ~ 35592377 (-) | True | XLOC_006779 |
| TCONS_00013041 | other | downstream | 715841 | 35430544 ~ 35459931 (-) | True | XLOC_006776 |
| TCONS_00013079 | other | upstream | 136615 | 36321091 ~ 36391491 (-) | False | XLOC_006796 |
| TCONS_00013081 | other | upstream | 136955 | 36321431 ~ 36330899 (-) | True | XLOC_006796 |
| TCONS_00013082 | other | upstream | 214784 | 36399260 ~ 36399375 (-) | True | XLOC_006797 |
| TCONS_00013090 | other | upstream | 345944 | 36530420 ~ 36535072 (-) | False | XLOC_006800 |
| TCONS_00013107 | other | upstream | 573079 | 36757555 ~ 36761316 (-) | True | XLOC_006809 |
