RNA id: TU37082


Basic Information

Item Value
RNA id TU37082
length 534
lncRNA type sense_over
GC content 0.46
exon number 2
gene id G32693
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13123711 ~ 13164017 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

AAAATATATTAAAATAGCAAACAGTTCTTTGAAATTGTAATAATATTTCACAATATTACCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTGTGTGTTTGTTGTATGGTCATTGAAATGACACTCATCCGACACTGTTCTCTTCCCCCAGGTGTAACATTCAAGGTAGCGTGATCTGCAACAACGCAGTGATTGGACGTGGAGCCGACATCAAGTACTGTCTCGTGGGCAGCGGCCAGCGCATAGAGCCAGAGGCTGAAAGAACCAATGAGGTCATCGTTGGATCAGACCAACTCATGGAGATCTAGAACCCTGGTGGAGATGGATCACAGACACTGAAGACGCCCAGATCAACCTGCTTCCATGTGCATAACCCCTGC

Function

GO:

id name namespace
GO:0009058 biosynthetic process biological_process

KEGG:

id description
K03241 EIF2B3; translation initiation factor eIF-2B subunit gamma

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37247 lncRNA downstream 3081 13120236 ~ 13120630 (-) True G32848
TU37109 lncRNA downstream 76800 13046262 ~ 13046911 (-) True G32715
TU37104 lncRNA downstream 77548 13045819 ~ 13046163 (-) True G32710
TU37220 lncRNA downstream 121169 13002231 ~ 13002542 (-) True G32823
TU37219 lncRNA downstream 123068 12999142 ~ 13000643 (-) True G32822
TU37253 lncRNA upstream 14212 13178229 ~ 13178450 (-) True G32854
TU37257 lncRNA upstream 19211 13183228 ~ 13183457 (-) True G32858
TU37261 lncRNA upstream 28449 13192466 ~ 13192687 (-) True G32862
TU37267 lncRNA upstream 70419 13234436 ~ 13234661 (-) True G32867
TU37268 lncRNA upstream 71651 13235668 ~ 13236132 (-) True G32868
CI01000004_13094468_13114401.mRNA mRNA downstream 8713 13093586 ~ 13114998 (-) True CI01000004_13094468_13114401
CI01000004_13089864_13091636.mRNA mRNA downstream 32042 13088583 ~ 13091669 (-) True CI01000004_13089864_13091636
CI01000004_13086552_13088659.mRNA mRNA downstream 34813 13084824 ~ 13088898 (-) True CI01000004_13086552_13088659
CI01000004_12952019_12956814.mRNA mRNA downstream 166897 12951759 ~ 12956814 (-) True CI01000004_12952019_12956814
CI01000004_12823734_12925962.mRNA mRNA downstream 197749 12823734 ~ 12925962 (-) True CI01000004_12823734_12925962
CI01000004_13208157_13210917.mRNA mRNA upstream 43864 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_13354130_13419831.mRNA mRNA upstream 190113 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13720679_13777075.mRNA mRNA upstream 556440 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_14041671_14073418.mRNA mRNA upstream 877059 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_14115087_14115790.mRNA mRNA upstream 950988 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
TU36531 other downstream 738931 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 1342760 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 1710804 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 2373070 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 3716790 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 1386783 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 1404776 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 1414441 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 1417389 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 1421154 14585171 ~ 14585745 (-) True G33756

Expression Profile