Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000004_13197104_13205895.mRNA |
| length | 2641 |
| RNA type | mRNA |
| GC content | 0.47 |
| exon number | 12 |
| gene id | CI01000004_13197104_13205895 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 13197104 ~ 13206585 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0015629 | actin cytoskeleton | cellular_component |
| id | description |
|---|---|
| K10457 | KLHL20, KLEIP; kelch-like protein 20 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU36970 | lncRNA | upstream | 3082 | 13193719 ~ 13194022 (+) | True | G32595 |
| TU36969 | lncRNA | upstream | 3943 | 13192718 ~ 13193161 (+) | True | G32594 |
| TU36967 | lncRNA | upstream | 14138 | 13182696 ~ 13182966 (+) | True | G32592 |
| TU36966 | lncRNA | upstream | 18654 | 13178229 ~ 13178450 (+) | True | G32591 |
| TU36963 | lncRNA | upstream | 25429 | 13171348 ~ 13171675 (+) | True | G32588 |
| TU36974 | lncRNA | downstream | 25002 | 13231587 ~ 13232951 (+) | True | G32599 |
| TU37294 | lncRNA | downstream | 50345 | 13256930 ~ 13257222 (+) | True | G32894 |
| TU37331 | lncRNA | downstream | 122729 | 13329314 ~ 13329550 (+) | True | G32926 |
| TU37332 | lncRNA | downstream | 124599 | 13331184 ~ 13331384 (+) | True | G32927 |
| TU37439 | lncRNA | downstream | 334008 | 13540593 ~ 13543079 (+) | True | G33029 |
| CI01000004_13062721_13076100.mRNA | mRNA | upstream | 120876 | 13062721 ~ 13076228 (+) | True | CI01000004_13062721_13076100 |
| CI01000004_13043279_13051835.mRNA | mRNA | upstream | 145140 | 13043237 ~ 13051964 (+) | False | CI01000004_13043279_13051835 |
| CI01000004_12984968_12997831.mRNA | mRNA | upstream | 199041 | 12984968 ~ 12998063 (+) | True | CI01000004_12984968_12997831 |
| CI01000004_12810922_12817913.mRNA | mRNA | upstream | 378557 | 12810572 ~ 12818547 (+) | True | CI01000004_12810922_12817913 |
| CI01000004_12764916_12775989.mRNA | mRNA | upstream | 420932 | 12764916 ~ 12776172 (+) | True | CI01000004_12764916_12775989 |
| CI01000004_13211489_13233786.mRNA | mRNA | downstream | 4904 | 13211489 ~ 13234194 (+) | True | CI01000004_13211489_13233786 |
| CI01000004_13467845_13475703.mRNA | mRNA | downstream | 261260 | 13467845 ~ 13476204 (+) | True | CI01000004_13467845_13475703 |
| CI01000004_13512059_13706090.mRNA | mRNA | downstream | 305474 | 13512059 ~ 13706090 (+) | True | CI01000004_13512059_13706090 |
| CI01000004_13708254_13713625.mRNA | mRNA | downstream | 501302 | 13707887 ~ 13714179 (+) | True | CI01000004_13708254_13713625 |
| CI01000004_13785437_13800307.mRNA | mRNA | downstream | 578231 | 13784816 ~ 13800307 (+) | True | CI01000004_13785437_13800307 |
| TU36655 | other | upstream | 541393 | 12642754 ~ 12655711 (+) | True | G32314 |
| TU36123 | other | upstream | 1001957 | 12192130 ~ 12195147 (+) | False | G31865 |
| TU35811 | other | upstream | 1529445 | 11664773 ~ 11665473 (+) | False | G31611 |
| TU35813 | other | upstream | 1529526 | 11664773 ~ 11665473 (+) | True | G31611 |
| TU35938 | other | upstream | 1554704 | 11637251 ~ 11642400 (+) | True | G31710 |
| TU37521 | other | downstream | 816962 | 14023547 ~ 14031127 (+) | True | G33092 |
| TU38554 | other | downstream | 1884659 | 15091244 ~ 15091969 (+) | True | CI01000004_15091390_15096502 |
| TU38784 | other | downstream | 2732772 | 15939357 ~ 15939950 (+) | True | G34220 |
| TU38340 | other | downstream | 2856830 | 16063415 ~ 16066464 (+) | True | G33815 |
| TU39001 | other | downstream | 3770743 | 16977328 ~ 17025469 (+) | False | G34400 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031168 | False | 2441 | mRNA | 0.50 | 12 | NC_007113.7 | 34112100 ~ 34126291 (+) |
| bowfin (Amia calva) | AMCG00005056 | True | 1776 | mRNA | 0.58 | 10 | CM030140.1 | 14066698 ~ 14075633 (-) |
