RNA id: TCONS_00013121


Basic Information

Item Value
RNA id TCONS_00013121
length 115
RNA type rRNA
GC content 0.53
exon number 1
gene id XLOC_006819
representative True

Chromosome Information

Item Value
chromosome id NC_007124.7
NCBI id CM002897.2
chromosome length 52186027
location 37178602 ~ 37178716 (-)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GCTGGCTGCTAGCTCTTtgtaactctcacatggtcgcacactgaagctaagcagggttgcactgggtcaatacctggatgggagaccacatgggaaagctaggttgctgctggaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000184368

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00013499 lncRNA downstream 68066 37110212 ~ 37110536 (-) True XLOC_006817
TCONS_00013498 lncRNA downstream 166366 37009812 ~ 37012236 (-) True XLOC_006815
TCONS_00013873 lncRNA downstream 180842 36995633 ~ 36997760 (-) True XLOC_006814
TCONS_00013101 lncRNA downstream 556677 36613162 ~ 36621925 (-) True XLOC_006805
TCONS_00013099 lncRNA downstream 566443 36587770 ~ 36612159 (-) True XLOC_006804
TCONS_00013136 lncRNA upstream 349445 37528161 ~ 37535327 (-) False XLOC_006829
TCONS_00013135 lncRNA upstream 349445 37528161 ~ 37535424 (-) False XLOC_006829
TCONS_00013874 lncRNA upstream 349445 37528161 ~ 37535785 (-) True XLOC_006829
TCONS_00013142 lncRNA upstream 428341 37607057 ~ 37608372 (-) True XLOC_006832
TCONS_00013145 lncRNA upstream 431088 37609804 ~ 37613031 (-) False XLOC_006833
TCONS_00013114 mRNA downstream 50632 37075322 ~ 37127970 (-) False XLOC_006816
TCONS_00013119 mRNA downstream 56385 37106039 ~ 37122217 (-) True XLOC_006816
TCONS_00013118 mRNA downstream 68615 37105818 ~ 37109987 (-) False XLOC_006816
TCONS_00013115 mRNA downstream 70292 37077982 ~ 37108310 (-) False XLOC_006816
TCONS_00013117 mRNA downstream 75476 37093426 ~ 37103126 (-) False XLOC_006816
TCONS_00013122 mRNA upstream 7587 37186303 ~ 37189560 (-) True XLOC_006820
TCONS_00013123 mRNA upstream 20582 37199298 ~ 37200120 (-) True XLOC_006821
TCONS_00013124 mRNA upstream 29744 37208460 ~ 37210369 (-) True XLOC_006822
TCONS_00013125 mRNA upstream 48334 37227050 ~ 37229245 (-) True XLOC_006823
TCONS_00013126 mRNA upstream 70282 37248998 ~ 37254777 (-) True XLOC_006824
TCONS_00013107 other downstream 417286 36757555 ~ 36761316 (-) True XLOC_006809
TCONS_00013090 other downstream 643530 36530420 ~ 36535072 (-) False XLOC_006800
TCONS_00013082 other downstream 779227 36399260 ~ 36399375 (-) True XLOC_006797
TCONS_00013079 other downstream 787111 36321091 ~ 36391491 (-) False XLOC_006796
TCONS_00013081 other downstream 847703 36321431 ~ 36330899 (-) True XLOC_006796
TCONS_00013139 other upstream 415799 37594515 ~ 37600539 (-) False XLOC_006831
TCONS_00013140 other upstream 419995 37598711 ~ 37599245 (-) True XLOC_006831
TCONS_00013157 other upstream 471957 37650673 ~ 37656690 (-) False XLOC_006839
TCONS_00013167 other upstream 1674421 38853137 ~ 38853252 (-) True XLOC_006846
TCONS_00013170 other upstream 2063839 39242555 ~ 39242672 (-) True XLOC_006848

Expression Profile

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