RNA id: TU33278



Basic Information


Item Value
RNA id TU33278
length 222
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G29402
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6770362 ~ 6770583 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTTCTATTCTACAAGCTTTCCATAACAATTAAAATGTTTAAATTTTAATTATGTTTATTTAGCAGCTAAAATAATAGACCATGTAGTAATTTGCATATCTGTAATATCAAAGATGAAAGTAAATAATGAGAGTAGTTTCATTTTGAATAAAAAAGAGCAACTGATTCTGTGTTGAAATTTTATTCACAACCGAGGAGAAGTCATGACATATATGACATATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU33266 lncRNA downstream 113977 6655223 ~ 6656385 (-) True G29391
TU33262 lncRNA downstream 140892 6629066 ~ 6629470 (-) True G29387
TU33261 lncRNA downstream 142093 6627976 ~ 6628269 (-) True G29386
TU33260 lncRNA downstream 142571 6627574 ~ 6627791 (-) True G29385
TU33029 lncRNA downstream 366641 6399639 ~ 6403721 (-) True G29188
TU33180 lncRNA upstream 1940 6772523 ~ 6841575 (-) False G29315
TU33284 lncRNA upstream 24739 6795322 ~ 6795621 (-) True G29408
TU33287 lncRNA upstream 33420 6804003 ~ 6804387 (-) True G29411
TU33290 lncRNA upstream 51384 6821967 ~ 6896950 (-) True G29414
TU33179 lncRNA upstream 57165 6831706 ~ 6841575 (-) True G29315
CI01000004_06677179_06740196.mRNA mRNA downstream 30166 6677179 ~ 6740196 (-) True CI01000004_06677179_06740196
CI01000004_06569673_06570071.mRNA mRNA downstream 200191 6569596 ~ 6570171 (-) True CI01000004_06569673_06570071
CI01000004_06555703_06558890.mRNA mRNA downstream 211472 6555477 ~ 6558890 (-) True CI01000004_06555703_06558890
CI01000004_06547877_06549227.mRNA mRNA downstream 221135 6547390 ~ 6549227 (-) True CI01000004_06547877_06549227
CI01000004_06539836_06541252.mRNA mRNA downstream 229110 6538904 ~ 6541252 (-) False CI01000004_06539836_06541252
CI01000004_06805399_06814604.mRNA mRNA upstream 34634 6805217 ~ 6814604 (-) True CI01000004_06805399_06814604
CI01000004_06827636_06828127.mRNA mRNA upstream 56861 6827444 ~ 6828364 (-) False CI01000004_06827636_06828127
CI01000004_06915152_06921193.mRNA mRNA upstream 144006 6914589 ~ 6921193 (-) True CI01000004_06915152_06921193
CI01000004_06960750_06963258.mRNA mRNA upstream 190092 6960675 ~ 6963282 (-) False CI01000004_06960750_06963258
CI01000004_07008022_07016495.mRNA mRNA upstream 237245 7007828 ~ 7017478 (-) True CI01000004_07008022_07016495
TU33263 other downstream 138455 6631293 ~ 6631907 (-) True G29388
TU33056 other downstream 224790 6534827 ~ 6545572 (-) True G29204
TU31692 other downstream 1142848 5620383 ~ 5627514 (-) True CI01000004_05617072_05627369
TU31341 other downstream 1566638 5178227 ~ 5203724 (-) False G27746
TU33567 other upstream 1193781 7964364 ~ 7965500 (-) True G29656
TU33669 other upstream 1583915 8354498 ~ 8358127 (-) False G29746
TU33670 other upstream 1583915 8354498 ~ 8358127 (-) True G29746
TU34309 other upstream 2607354 9377937 ~ 9406921 (-) True G30316
TU35313 other upstream 3975854 10746437 ~ 10750641 (-) True G31203

Expression Profile