RNA id: TU32767



Basic Information


Item Value
RNA id TU32767
length 203
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G28968
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 8922483 ~ 8922685 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TATTTTTCTCTAATTCAGTATTTACTTAGTGTTATGTTCTCTATTCTATGGAAGAAGTGAAACTGAAAAGAAAAACCATTCATTACACACAGACATGCAAGTATTCATTATGTGAAATTTTCAATGACTACATGTTTTAACTGCTGTGACAAAATCCAGACAGTTATTTTATTCAATCTAAAATATCACTTTTTCATCCAAAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU32758 lncRNA upstream 16102 8906172 ~ 8906381 (+) True G28959
TU32754 lncRNA upstream 26241 8895462 ~ 8896242 (+) True G28955
TU32734 lncRNA upstream 39883 8882396 ~ 8882600 (+) True G28947
TU32714 lncRNA upstream 60573 8861235 ~ 8861910 (+) True G28933
TU32688 lncRNA upstream 239478 8682707 ~ 8683005 (+) True G28909
TU32768 lncRNA downstream 37 8922722 ~ 8922940 (+) True G28969
TU32770 lncRNA downstream 3110 8925795 ~ 8926080 (+) True G28971
TU32772 lncRNA downstream 4460 8927145 ~ 8927490 (+) True G28973
TU32774 lncRNA downstream 13734 8936419 ~ 8938863 (+) True G28975
TU32775 lncRNA downstream 16281 8938966 ~ 8939175 (+) True G28976
CI01000004_08875722_08877149.mRNA mRNA upstream 44976 8875722 ~ 8877507 (+) True CI01000004_08875722_08877149
CI01000004_08866163_08873681.mRNA mRNA upstream 48687 8866034 ~ 8873796 (+) True CI01000004_08866163_08873681
CI01000004_08823382_08844233.mRNA mRNA upstream 78138 8822749 ~ 8844345 (+) True CI01000004_08823382_08844233
CI01000004_08806791_08812203.mRNA mRNA upstream 109921 8806791 ~ 8812562 (+) True CI01000004_08806791_08812203
CI01000004_08746864_08765484.mRNA mRNA upstream 156578 8746484 ~ 8765905 (+) True CI01000004_08746864_08765484
CI01000004_08947119_08949558.mRNA mRNA downstream 24434 8947119 ~ 8949644 (+) True CI01000004_08947119_08949558
CI01000004_08976512_08980033.mRNA mRNA downstream 53569 8976254 ~ 8980958 (+) False CI01000004_08976512_08980033
CI01000004_08987501_08991239.mRNA mRNA downstream 64473 8987158 ~ 8991469 (+) True CI01000004_08987501_08991239
CI01000004_08996083_08997863.mRNA mRNA downstream 73398 8996083 ~ 8997863 (+) True CI01000004_08996083_08997863
CI01000004_09002274_09004879.mRNA mRNA downstream 79357 9002042 ~ 9005023 (+) True CI01000004_09002274_09004879
TU32637 other upstream 322880 8599235 ~ 8599603 (+) True G28859
TU32590 other upstream 471256 8439958 ~ 8451227 (+) True G28818
TU32454 other upstream 1266100 7654772 ~ 7654879 (+) True G28706
TU32079 other upstream 2348062 6572819 ~ 6574421 (+) True G28354
TU32005 other upstream 2420396 6470028 ~ 6502087 (+) True G28302
TU32792 other downstream 53753 8976438 ~ 8980984 (+) False CI01000004_08976512_08980033
TU32793 other downstream 53753 8976438 ~ 8980984 (+) True CI01000004_08976512_08980033
TU34813 other downstream 1574691 10497376 ~ 10497788 (+) True G30797
TU35938 other downstream 2714566 11637251 ~ 11642400 (+) True G31710
TU35811 other downstream 2742088 11664773 ~ 11665473 (+) False G31611

Expression Profile