RNA id: TU35294


Basic Information

Item Value
RNA id TU35294
length 207
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G31186
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 10666929 ~ 10667135 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TCACTGAGCTGTTTTCACACAGTCAAAACCACAAAAATCAAAATGAGTAGACATATAATCGCATATTTTCGATAACAAGATCAAAAAGTCACATCAAGATCAGCTGAAAATGTCATTTTAAAGTCTAAAGCAGAGCTAATTAGCCATTGTGTGCTCAAAACGCAATGTATTTAAAGAACGGCTCACCACTTTAGCCAAGCTATTGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU35292 lncRNA downstream 1770 10664784 ~ 10665159 (-) True G31184
TU35287 lncRNA downstream 12990 10653690 ~ 10653939 (-) True G31179
TU35283 lncRNA downstream 13421 10644826 ~ 10653508 (-) True G31176
TU35280 lncRNA downstream 30546 10636170 ~ 10636383 (-) True G31173
TU35279 lncRNA downstream 35208 10629944 ~ 10631721 (-) True G31172
TU35298 lncRNA upstream 3306 10670441 ~ 10670844 (-) True G31190
TU35253 lncRNA upstream 9282 10676417 ~ 10681007 (-) True G31148
TU35250 lncRNA upstream 26232 10693367 ~ 10693734 (-) True G31145
TU35243 lncRNA upstream 26692 10693827 ~ 10696909 (-) True CI01000004_10692864_10704094
TU35304 lncRNA upstream 45151 10712286 ~ 10712931 (-) True G31196
CI01000004_10619819_10627261.mRNA mRNA downstream 39668 10619019 ~ 10627261 (-) True CI01000004_10619819_10627261
CI01000004_10553379_10573352.mRNA mRNA downstream 91686 10553037 ~ 10575243 (-) True CI01000004_10553379_10573352
CI01000004_10458668_10465442.mRNA mRNA downstream 201226 10458662 ~ 10465703 (-) True CI01000004_10458668_10465442
CI01000004_10436514_10438365.mRNA mRNA downstream 227470 10436499 ~ 10439459 (-) True CI01000004_10436514_10438365
CI01000004_10290550_10295288.mRNA mRNA downstream 371572 10289863 ~ 10295357 (-) True CI01000004_10290550_10295288
CI01000004_10692864_10704094.mRNA mRNA upstream 25502 10692637 ~ 10704094 (-) False CI01000004_10692864_10704094
CI01000004_10757852_10760211.mRNA mRNA upstream 90408 10757543 ~ 10761142 (-) True CI01000004_10757852_10760211
CI01000004_10766385_10766860.mRNA mRNA upstream 99205 10766340 ~ 10766860 (-) True CI01000004_10766385_10766860
CI01000004_10788659_10809214.mRNA mRNA upstream 121524 10788659 ~ 10809805 (-) True CI01000004_10788659_10809214
CI01000004_10847650_10847940.mRNA mRNA upstream 180422 10847557 ~ 10847995 (-) True CI01000004_10847650_10847940
TU34309 other downstream 1260008 9377937 ~ 9406921 (-) True G30316
TU33669 other downstream 2308802 8354498 ~ 8358127 (-) False G29746
TU33670 other downstream 2308802 8354498 ~ 8358127 (-) True G29746
TU33567 other downstream 2701429 7964364 ~ 7965500 (-) True G29656
TU33263 other downstream 4035022 6631293 ~ 6631907 (-) True G29388
TU35313 other upstream 79302 10746437 ~ 10750641 (-) True G31203
TU36279 other upstream 740330 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU36455 other upstream 1109384 11776519 ~ 11780951 (-) True G32150
TU36531 other upstream 1709033 12376168 ~ 12384780 (-) True G32207
TU38237 other upstream 3883665 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256

Expression Profile