RNA id: TU36347



Basic Information


Item Value
RNA id TU36347
length 224
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G32059
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11504640 ~ 11504863 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GGCATGCAACAGTCTGGGCCTCTGGGGTTTCTCCACACCGTAACTCCCATAGATGTGGGAAAGACTTTAAGGTGGACTTACCATGTTCCACATTGTCCACAGCCCAAGATTTGCACTGTTGGCACCTTTAAAAAACCAACATTTGGCATTGGCACAAGTGACCAAAGGAGTGACCATAACAGCCTGACCATGAATATTGATTCTGCAGAGCTCCAGACAAACAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU35775 lncRNA downstream 173071 11331311 ~ 11331569 (-) True G31580
TU35734 lncRNA downstream 315664 11188482 ~ 11188976 (-) True G31542
TU35676 lncRNA downstream 434917 11069225 ~ 11069723 (-) True G31486
TU35670 lncRNA downstream 436754 11062670 ~ 11067886 (-) True G31484
TU35630 lncRNA downstream 569933 10934298 ~ 10934707 (-) True G31466
TU36403 lncRNA upstream 33568 11538431 ~ 11541526 (-) True G32103
TU36411 lncRNA upstream 76586 11581449 ~ 11581990 (-) True G32111
TU36412 lncRNA upstream 79280 11584143 ~ 11584391 (-) True G32112
TU36418 lncRNA upstream 104161 11609024 ~ 11618594 (-) False G32117
TU36417 lncRNA upstream 110968 11615831 ~ 11618594 (-) True G32117
CI01000004_11454536_11463067.mRNA mRNA downstream 40089 11454425 ~ 11464551 (-) True CI01000004_11454536_11463067
CI01000004_11407198_11412220.mRNA mRNA downstream 91886 11406957 ~ 11412754 (-) False CI01000004_11407198_11412220
CI01000004_11232801_11249384.mRNA mRNA downstream 255256 11231443 ~ 11249384 (-) True CI01000004_11232801_11249384
CI01000004_11172493_11174547.mRNA mRNA downstream 328773 11172215 ~ 11175867 (-) True CI01000004_11172493_11174547
CI01000004_11073846_11086948.mRNA mRNA downstream 417692 11073679 ~ 11086948 (-) True CI01000004_11073846_11086948
CI01000004_11565906_11578581.mRNA mRNA upstream 60122 11564985 ~ 11578946 (-) True CI01000004_11565906_11578581
CI01000004_11637053_11663228.mRNA mRNA upstream 132135 11636998 ~ 11663318 (-) True CI01000004_11637053_11663228
CI01000004_11674138_11680916.mRNA mRNA upstream 168872 11673735 ~ 11680916 (-) True CI01000004_11674138_11680916
CI01000004_11681649_11693474.mRNA mRNA upstream 176594 11681457 ~ 11693474 (-) True CI01000004_11681649_11693474
CI01000004_11695427_11698763.mRNA mRNA upstream 189657 11694520 ~ 11698763 (-) True CI01000004_11695427_11698763
TU36279 other downstream 91733 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 753999 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 2097719 9377937 ~ 9406921 (-) True G30316
TU33669 other downstream 3146513 8354498 ~ 8358127 (-) False G29746
TU33670 other downstream 3146513 8354498 ~ 8358127 (-) True G29746
TU36455 other upstream 271656 11776519 ~ 11780951 (-) True G32150
TU36531 other upstream 871305 12376168 ~ 12384780 (-) True G32207
TU38237 other upstream 3045937 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 3063930 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 3073595 14578458 ~ 14579001 (-) True G33750

Expression Profile