RNA id: TU37207



Basic Information


Item Value
RNA id TU37207
length 326
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G32810
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 12982456 ~ 12982781 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


ATTAAATTTAACATATAAGAATTGAGTTGGAATTAATCAAATTAAATCCTTAAAAGTCAACCATTTAAAATGTGTAAAATTAGCAAACACCATTACAAAAACCACAAACTGACAAAGAGTGAAACTGACCAACTAAATGGAATACTGATCCCCATAATGGTGACCAAACATTTACAATAAAATCAACATCAACATCTAAACCTCTGTTACTTCATGTGTTTCTCTTTCCTTCAGTGATTCTGCTTGTTATCAGGTGTCTTCAATGTTGGCAATAAAAAATAAAGAGTTCTTAATTCACCATTGACATCTGTCTGTTATCCTGATAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU37195 lncRNA downstream 16353 12965870 ~ 12966103 (-) True G32798
TU37114 lncRNA downstream 60922 12913214 ~ 12921534 (-) True G32720
TU37176 lncRNA downstream 184525 12797682 ~ 12797931 (-) True CI01000004_12781663_12809789
TU37095 lncRNA downstream 200966 12775782 ~ 12781490 (-) True G32701
TU37101 lncRNA downstream 269280 12707058 ~ 12713176 (-) True G32707
TU37219 lncRNA upstream 16361 12999142 ~ 13000643 (-) True G32822
TU37220 lncRNA upstream 19450 13002231 ~ 13002542 (-) True G32823
TU37104 lncRNA upstream 63038 13045819 ~ 13046163 (-) True G32710
TU37109 lncRNA upstream 63481 13046262 ~ 13046911 (-) True G32715
TU37247 lncRNA upstream 137455 13120236 ~ 13120630 (-) True G32848
CI01000004_12952019_12956814.mRNA mRNA downstream 25642 12951759 ~ 12956814 (-) True CI01000004_12952019_12956814
CI01000004_12823734_12925962.mRNA mRNA downstream 56494 12823734 ~ 12925962 (-) True CI01000004_12823734_12925962
CI01000004_12781663_12809789.mRNA mRNA downstream 172667 12781525 ~ 12809789 (-) False CI01000004_12781663_12809789
CI01000004_12748162_12752913.mRNA mRNA downstream 229181 12747939 ~ 12753275 (-) True CI01000004_12748162_12752913
CI01000004_12574165_12577698.mRNA mRNA downstream 402277 12574085 ~ 12580179 (-) True CI01000004_12574165_12577698
CI01000004_13086552_13088659.mRNA mRNA upstream 102043 13084824 ~ 13088898 (-) True CI01000004_13086552_13088659
CI01000004_13089864_13091636.mRNA mRNA upstream 105802 13088583 ~ 13091669 (-) True CI01000004_13089864_13091636
CI01000004_13094468_13114401.mRNA mRNA upstream 110805 13093586 ~ 13114998 (-) True CI01000004_13094468_13114401
CI01000004_13127356_13168751.mRNA mRNA upstream 144575 13127356 ~ 13168751 (-) False CI01000004_13127356_13168751
CI01000004_13208157_13210917.mRNA mRNA upstream 225100 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
TU36531 other downstream 597676 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 1201505 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 1569549 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 2231815 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 3575535 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 1568019 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 1586012 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 1595677 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 1598625 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 1602390 14585171 ~ 14585745 (-) True G33756

Expression Profile