RNA id: TU36967


Basic Information

Item Value
RNA id TU36967
length 271
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G32592
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13182696 ~ 13182966 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

ATTATACAAACCCGATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAAAAGGAATGCAATAATTTACAAATCTCATAAACTTATATTTTATTCACAATAGAATATAGATAACATATCAAATGTTGAAAGTGAGACATTTTGAAATGTCATGCCAAATATTGGCTCATTTTGGATTTCATGAGAGCTACACATTCCAAAAAAGTTGGGACAGGTAGCAATAAGAGGCCGGAAAAGTTAAATGTACATATAAGGAACAGCTGGAGG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36966 lncRNA upstream 4246 13178229 ~ 13178450 (+) True G32591
TU36963 lncRNA upstream 11021 13171348 ~ 13171675 (+) True G32588
TU36883 lncRNA upstream 17438 13145133 ~ 13165258 (+) True G32515
TU36881 lncRNA upstream 18730 13145133 ~ 13163966 (+) False G32515
TU36900 lncRNA upstream 122584 13057006 ~ 13060112 (+) True G32526
TU36969 lncRNA downstream 9752 13192718 ~ 13193161 (+) True G32594
TU36970 lncRNA downstream 10753 13193719 ~ 13194022 (+) True G32595
TU36974 lncRNA downstream 48621 13231587 ~ 13232951 (+) True G32599
TU37294 lncRNA downstream 73964 13256930 ~ 13257222 (+) True G32894
TU37331 lncRNA downstream 146348 13329314 ~ 13329550 (+) True G32926
CI01000004_13062721_13076100.mRNA mRNA upstream 106468 13062721 ~ 13076228 (+) True CI01000004_13062721_13076100
CI01000004_13043279_13051835.mRNA mRNA upstream 130732 13043237 ~ 13051964 (+) False CI01000004_13043279_13051835
CI01000004_12984968_12997831.mRNA mRNA upstream 184633 12984968 ~ 12998063 (+) True CI01000004_12984968_12997831
CI01000004_12810922_12817913.mRNA mRNA upstream 364149 12810572 ~ 12818547 (+) True CI01000004_12810922_12817913
CI01000004_12764916_12775989.mRNA mRNA upstream 406524 12764916 ~ 12776172 (+) True CI01000004_12764916_12775989
CI01000004_13197104_13205895.mRNA mRNA downstream 14138 13197104 ~ 13206585 (+) True CI01000004_13197104_13205895
CI01000004_13211489_13233786.mRNA mRNA downstream 28523 13211489 ~ 13234194 (+) True CI01000004_13211489_13233786
CI01000004_13467845_13475703.mRNA mRNA downstream 284879 13467845 ~ 13476204 (+) True CI01000004_13467845_13475703
CI01000004_13512059_13706090.mRNA mRNA downstream 329093 13512059 ~ 13706090 (+) True CI01000004_13512059_13706090
CI01000004_13708254_13713625.mRNA mRNA downstream 524921 13707887 ~ 13714179 (+) True CI01000004_13708254_13713625
TU36655 other upstream 526985 12642754 ~ 12655711 (+) True G32314
TU36123 other upstream 987549 12192130 ~ 12195147 (+) False G31865
TU35811 other upstream 1515037 11664773 ~ 11665473 (+) False G31611
TU35813 other upstream 1515118 11664773 ~ 11665473 (+) True G31611
TU35938 other upstream 1540296 11637251 ~ 11642400 (+) True G31710
TU37521 other downstream 840581 14023547 ~ 14031127 (+) True G33092
TU38554 other downstream 1908278 15091244 ~ 15091969 (+) True CI01000004_15091390_15096502
TU38784 other downstream 2756391 15939357 ~ 15939950 (+) True G34220
TU38340 other downstream 2880449 16063415 ~ 16066464 (+) True G33815
TU39001 other downstream 3794362 16977328 ~ 17025469 (+) False G34400

Expression Profile