RNA id: TU37261


Basic Information

Item Value
RNA id TU37261
length 222
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G32862
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13192466 ~ 13192687 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTAAAGCATGGTACTTGCAAAAAATCAAGAAAATTAGATTTAAACAATAAGACTAAACGTGTTGAGCTATATAACAATAATTTGTTTTCTGTCTATAAATATATCAAAACAGTTGTTCCCTTGTCTATTAAAACATGTAATATATTAAAGCGTCTTTGGTGTTTCCATGGTTTCTACAAAATAAAACCGGAAACTGAGGGTAACGCAGGTATGATGCAATTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU37257 lncRNA downstream 9009 13183228 ~ 13183457 (-) True G32858
TU37253 lncRNA downstream 14016 13178229 ~ 13178450 (-) True G32854
TU37082 lncRNA downstream 28449 13123711 ~ 13164017 (-) True G32693
TU37248 lncRNA downstream 51479 13123239 ~ 13140987 (-) True G32849
TU37247 lncRNA downstream 71836 13120236 ~ 13120630 (-) True G32848
TU37267 lncRNA upstream 41749 13234436 ~ 13234661 (-) True G32867
TU37268 lncRNA upstream 42981 13235668 ~ 13236132 (-) True G32868
TU37280 lncRNA upstream 46652 13239339 ~ 13239672 (-) True G32880
TU37282 lncRNA upstream 47819 13240506 ~ 13240742 (-) True G32882
TU37317 lncRNA upstream 108341 13301028 ~ 13301405 (-) True G32917
CI01000004_13127356_13168751.mRNA mRNA downstream 23715 13127356 ~ 13168751 (-) False CI01000004_13127356_13168751
CI01000004_13094468_13114401.mRNA mRNA downstream 77468 13093586 ~ 13114998 (-) True CI01000004_13094468_13114401
CI01000004_13089864_13091636.mRNA mRNA downstream 100797 13088583 ~ 13091669 (-) True CI01000004_13089864_13091636
CI01000004_13086552_13088659.mRNA mRNA downstream 103568 13084824 ~ 13088898 (-) True CI01000004_13086552_13088659
CI01000004_12952019_12956814.mRNA mRNA downstream 235652 12951759 ~ 12956814 (-) True CI01000004_12952019_12956814
CI01000004_13208157_13210917.mRNA mRNA upstream 15194 13207881 ~ 13210917 (-) True CI01000004_13208157_13210917
CI01000004_13354130_13419831.mRNA mRNA upstream 161443 13354130 ~ 13419831 (-) True CI01000004_13354130_13419831
CI01000004_13720679_13777075.mRNA mRNA upstream 527770 13720457 ~ 13777075 (-) True CI01000004_13720679_13777075
CI01000004_14041671_14073418.mRNA mRNA upstream 848389 14041076 ~ 14073770 (-) True CI01000004_14041671_14073418
CI01000004_14115087_14115790.mRNA mRNA upstream 922318 14115005 ~ 14115790 (-) True CI01000004_14115087_14115790
TU36531 other downstream 807686 12376168 ~ 12384780 (-) True G32207
TU36455 other downstream 1411515 11776519 ~ 11780951 (-) True G32150
TU36279 other downstream 1779559 11407465 ~ 11412907 (-) True CI01000004_11407198_11412220
TU35313 other downstream 2441825 10746437 ~ 10750641 (-) True G31203
TU34309 other downstream 3785545 9377937 ~ 9406921 (-) True G30316
TU38237 other upstream 1358113 14550800 ~ 14551284 (-) True CI01000004_14543631_14551256
TU38247 other upstream 1376106 14568793 ~ 14569264 (-) True G33746
TU38255 other upstream 1385771 14578458 ~ 14579001 (-) True G33750
TU38261 other upstream 1388719 14581406 ~ 14581873 (-) True G33755
TU38263 other upstream 1392484 14585171 ~ 14585745 (-) True G33756

Expression Profile