RNA id: TU36969



Basic Information


Item Value
RNA id TU36969
length 444
lncRNA type inter_gene
GC content 0.34
exon number 1
gene id G32594
representative True

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13192718 ~ 13193161 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAGTAGCTAACATAGCATAATCAGATGCAGCTTTATTTTTTAGTAACAGTAATACAGCATTTTCTCCATCATACAATACGTTTTAAAATTAATTGCATGCCATTTATCAACACAAGCCATCCAGCATTTAATATGATATTCTAAAATCGATCTAGCTTACTGCAGTGTGCAACAAGTGTCTCACAGCAGCCGCCGAGCGAGTAACGTTATAACATCATTTTCAACACACTCAAATGTATCTAATATGATAAACAGAGCTGTGTTACCTCATACTCATGACCGGAAAAGCGGAAGTGGCGCCGATGACTGTGGCATAATAAAAGTTCCGCTGCTCGTGAGGCGTGTGTTGCGCAATCGCTCCAGCGGCCACAACACTCGGTCCTGCTCTGCTTCATACTACAATAATGTTAATAATCGCATCCATGAACATGATTTCTTCCCGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU36967 lncRNA upstream 9752 13182696 ~ 13182966 (+) True G32592
TU36966 lncRNA upstream 14268 13178229 ~ 13178450 (+) True G32591
TU36963 lncRNA upstream 21043 13171348 ~ 13171675 (+) True G32588
TU36883 lncRNA upstream 27460 13145133 ~ 13165258 (+) True G32515
TU36881 lncRNA upstream 28752 13145133 ~ 13163966 (+) False G32515
TU36970 lncRNA downstream 558 13193719 ~ 13194022 (+) True G32595
TU36974 lncRNA downstream 38426 13231587 ~ 13232951 (+) True G32599
TU37294 lncRNA downstream 63769 13256930 ~ 13257222 (+) True G32894
TU37331 lncRNA downstream 136153 13329314 ~ 13329550 (+) True G32926
TU37332 lncRNA downstream 138023 13331184 ~ 13331384 (+) True G32927
CI01000004_13062721_13076100.mRNA mRNA upstream 116490 13062721 ~ 13076228 (+) True CI01000004_13062721_13076100
CI01000004_13043279_13051835.mRNA mRNA upstream 140754 13043237 ~ 13051964 (+) False CI01000004_13043279_13051835
CI01000004_12984968_12997831.mRNA mRNA upstream 194655 12984968 ~ 12998063 (+) True CI01000004_12984968_12997831
CI01000004_12810922_12817913.mRNA mRNA upstream 374171 12810572 ~ 12818547 (+) True CI01000004_12810922_12817913
CI01000004_12764916_12775989.mRNA mRNA upstream 416546 12764916 ~ 12776172 (+) True CI01000004_12764916_12775989
CI01000004_13197104_13205895.mRNA mRNA downstream 3943 13197104 ~ 13206585 (+) True CI01000004_13197104_13205895
CI01000004_13211489_13233786.mRNA mRNA downstream 18328 13211489 ~ 13234194 (+) True CI01000004_13211489_13233786
CI01000004_13467845_13475703.mRNA mRNA downstream 274684 13467845 ~ 13476204 (+) True CI01000004_13467845_13475703
CI01000004_13512059_13706090.mRNA mRNA downstream 318898 13512059 ~ 13706090 (+) True CI01000004_13512059_13706090
CI01000004_13708254_13713625.mRNA mRNA downstream 514726 13707887 ~ 13714179 (+) True CI01000004_13708254_13713625
TU36655 other upstream 537007 12642754 ~ 12655711 (+) True G32314
TU36123 other upstream 997571 12192130 ~ 12195147 (+) False G31865
TU35811 other upstream 1525059 11664773 ~ 11665473 (+) False G31611
TU35813 other upstream 1525140 11664773 ~ 11665473 (+) True G31611
TU35938 other upstream 1550318 11637251 ~ 11642400 (+) True G31710
TU37521 other downstream 830386 14023547 ~ 14031127 (+) True G33092
TU38554 other downstream 1898083 15091244 ~ 15091969 (+) True CI01000004_15091390_15096502
TU38784 other downstream 2746196 15939357 ~ 15939950 (+) True G34220
TU38340 other downstream 2870254 16063415 ~ 16066464 (+) True G33815
TU39001 other downstream 3784167 16977328 ~ 17025469 (+) False G34400

Expression Profile