RNA id: TU37294


Basic Information

Item Value
RNA id TU37294
length 293
lncRNA type inter_gene
GC content 0.50
exon number 1
gene id G32894
representative True

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13256930 ~ 13257222 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CGCGGCAGAAGTTGAAGAATCCTTAACTTTTCAAATGCCAACAAAGGCGTCAGCCAATCAGATCACAGATGCTAGCCAATTGCGTTCATGCAACACCGGAAAGTAATGTGATTGGCTGTTGTCACTATGACAGTCGCGTCAGTGCAAGCTTCAGACACGCCCTCCGTCAAGCGTTGATGCCGACACCCCGTGTGAATGCAGCGTTACTGCAGTTGCTTCAACCCACGGAGTTGCACAACAACTCGCGGCAACAGTGAAAAAGTAACCCAGTTCTCTGGGAAAATCGCAGACCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU36974 lncRNA upstream 23979 13231587 ~ 13232951 (+) True G32599
TU36970 lncRNA upstream 62908 13193719 ~ 13194022 (+) True G32595
TU36969 lncRNA upstream 63769 13192718 ~ 13193161 (+) True G32594
TU36967 lncRNA upstream 73964 13182696 ~ 13182966 (+) True G32592
TU36966 lncRNA upstream 78480 13178229 ~ 13178450 (+) True G32591
TU37331 lncRNA downstream 72092 13329314 ~ 13329550 (+) True G32926
TU37332 lncRNA downstream 73962 13331184 ~ 13331384 (+) True G32927
TU37439 lncRNA downstream 283371 13540593 ~ 13543079 (+) True G33029
TU37369 lncRNA downstream 383335 13640557 ~ 13666445 (+) True G32961
TU37367 lncRNA downstream 393836 13651058 ~ 13752853 (+) True G32959
CI01000004_13211489_13233786.mRNA mRNA upstream 22736 13211489 ~ 13234194 (+) True CI01000004_13211489_13233786
CI01000004_13197104_13205895.mRNA mRNA upstream 50345 13197104 ~ 13206585 (+) True CI01000004_13197104_13205895
CI01000004_13062721_13076100.mRNA mRNA upstream 180702 13062721 ~ 13076228 (+) True CI01000004_13062721_13076100
CI01000004_13043279_13051835.mRNA mRNA upstream 204966 13043237 ~ 13051964 (+) False CI01000004_13043279_13051835
CI01000004_12984968_12997831.mRNA mRNA upstream 258867 12984968 ~ 12998063 (+) True CI01000004_12984968_12997831
CI01000004_13467845_13475703.mRNA mRNA downstream 210623 13467845 ~ 13476204 (+) True CI01000004_13467845_13475703
CI01000004_13512059_13706090.mRNA mRNA downstream 254837 13512059 ~ 13706090 (+) True CI01000004_13512059_13706090
CI01000004_13708254_13713625.mRNA mRNA downstream 450665 13707887 ~ 13714179 (+) True CI01000004_13708254_13713625
CI01000004_13785437_13800307.mRNA mRNA downstream 527594 13784816 ~ 13800307 (+) True CI01000004_13785437_13800307
CI01000004_13959453_14004808.mRNA mRNA downstream 702231 13959453 ~ 14004808 (+) True CI01000004_13959453_14004808
TU36655 other upstream 601219 12642754 ~ 12655711 (+) True G32314
TU36123 other upstream 1061783 12192130 ~ 12195147 (+) False G31865
TU35811 other upstream 1589271 11664773 ~ 11665473 (+) False G31611
TU35813 other upstream 1589352 11664773 ~ 11665473 (+) True G31611
TU35938 other upstream 1614530 11637251 ~ 11642400 (+) True G31710
TU37521 other downstream 766325 14023547 ~ 14031127 (+) True G33092
TU38554 other downstream 1834022 15091244 ~ 15091969 (+) True CI01000004_15091390_15096502
TU38784 other downstream 2682135 15939357 ~ 15939950 (+) True G34220
TU38340 other downstream 2806193 16063415 ~ 16066464 (+) True G33815
TU39001 other downstream 3720106 16977328 ~ 17025469 (+) False G34400

Expression Profile