Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU38937 |
| length | 1170 |
| lncRNA type | antisense_over |
| GC content | 0.27 |
| exon number | 5 |
| gene id | G34357 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 16665580 ~ 16672434 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU38844 | lncRNA | upstream | 19358 | 16641342 ~ 16646222 (+) | True | G34277 |
| TU38905 | lncRNA | upstream | 193347 | 16472007 ~ 16472233 (+) | True | G34330 |
| TU38891 | lncRNA | upstream | 209954 | 16449680 ~ 16455626 (+) | True | G34323 |
| TU38889 | lncRNA | upstream | 216490 | 16448846 ~ 16449090 (+) | True | G34322 |
| TU38864 | lncRNA | upstream | 356274 | 16301233 ~ 16309306 (+) | True | G34297 |
| TU38942 | lncRNA | downstream | 110 | 16672544 ~ 16672767 (+) | True | G34359 |
| TU38944 | lncRNA | downstream | 1487 | 16673921 ~ 16674301 (+) | True | G34361 |
| TU38945 | lncRNA | downstream | 2071 | 16674505 ~ 16674814 (+) | True | G34362 |
| TU38976 | lncRNA | downstream | 256040 | 16928474 ~ 16956174 (+) | False | G34391 |
| TU38989 | lncRNA | downstream | 278437 | 16950871 ~ 16952619 (+) | False | G34399 |
| CI01000004_16649360_16654303.mRNA | mRNA | upstream | 11227 | 16649171 ~ 16654353 (+) | True | CI01000004_16649360_16654303 |
| CI01000004_16579927_16586961.mRNA | mRNA | upstream | 78383 | 16579927 ~ 16587197 (+) | True | CI01000004_16579927_16586961 |
| CI01000004_16567132_16570668.mRNA | mRNA | upstream | 94212 | 16567132 ~ 16571368 (+) | True | CI01000004_16567132_16570668 |
| CI01000004_16490931_16555397.mRNA | mRNA | upstream | 109587 | 16490931 ~ 16555993 (+) | True | CI01000004_16490931_16555397 |
| CI01000004_16467711_16471121.mRNA | mRNA | upstream | 194073 | 16467711 ~ 16471507 (+) | True | CI01000004_16467711_16471121 |
| CI01000004_16695941_16729500.mRNA | mRNA | downstream | 23199 | 16695633 ~ 16729719 (+) | True | CI01000004_16695941_16729500 |
| CI01000004_16812706_16814956.mRNA | mRNA | downstream | 140272 | 16812706 ~ 16815068 (+) | True | CI01000004_16812706_16814956 |
| CI01000004_16869205_16944944.mRNA | mRNA | downstream | 196771 | 16869205 ~ 16944944 (+) | True | CI01000004_16869205_16944944 |
| CI01000004_17062704_17110319.mRNA | mRNA | downstream | 390270 | 17062704 ~ 17110319 (+) | True | CI01000004_17062704_17110319 |
| CI01000004_17214619_17236647.mRNA | mRNA | downstream | 542185 | 17214619 ~ 17236674 (+) | True | CI01000004_17214619_17236647 |
| TU38340 | other | upstream | 599116 | 16063415 ~ 16066464 (+) | True | G33815 |
| TU38784 | other | upstream | 725630 | 15939357 ~ 15939950 (+) | True | G34220 |
| TU38554 | other | upstream | 1573611 | 15091244 ~ 15091969 (+) | True | CI01000004_15091390_15096502 |
| TU37521 | other | upstream | 2628680 | 14023547 ~ 14031127 (+) | True | G33092 |
| TU36655 | other | upstream | 4009869 | 12642754 ~ 12655711 (+) | True | G32314 |
| TU39001 | other | downstream | 304894 | 16977328 ~ 17025469 (+) | False | G34400 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00031370 | True | 1646 | lncRNA | 0.42 | 2 | NC_007113.7 | 39036182 ~ 39046184 (+) |
