RNA id: CI01000006_02613864_02614742.mRNA



Basic Information


Item Value
RNA id CI01000006_02613864_02614742.mRNA
length 587
RNA type mRNA
GC content 0.47
exon number 4
gene id CI01000006_02613864_02614742
representative True

Chromosome Information


Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 2613754 ~ 2614760 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTATAAAAACATGGAACAATAATCCGGATTCGACTCTATAAGAAGAGGCAGGCTCGGAAACACTGCTGCTAGTCACTTTGGCTCCTGTTTGCCAGCACTCCAGAGTAACGATGAAGATCCTGTTTCTTATCCCACTTTGCCTGAGCCTGACTCTCAGCAGCTATGCACAAAAGCCTGAACCCTGCAAGTCTCCACCCTTGCTAGAAGGAGCGCTGACCGCGTTCATTCCAGGGCAACACTTGCGTGTTTTTGAGAAATTCTCCTATGATGCCTATGGACAGAATGTCCGTGTTCTAGCGTCTGGGAAGGAGGACAACCAGACCTTCTTTGTAGACAGGCTTCTGCTCTTTAGAGAGGGGGTCAGCTATGAGATCCACTACCACAACCAAACTTGTATCAAGACTGCATTAAAGGTACCATTCAGACATATTGGGGTTCCCCATGATGCCCATTTCCTGAATCAAATGGTCTTGGGTAGCAGCTCTACACCAGAACAAGGATTGCTTGTCAATAACTGGAATGGAACAGCGGAGGAAACAAAAGGTAATATGTGTCGTTATGCTGCCTGATGATTCACACAGACTGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU47069 lncRNA upstream 167820 2445724 ~ 2445934 (+) True G41461
TU47065 lncRNA upstream 170778 2442612 ~ 2442976 (+) True G41457
TU47061 lncRNA upstream 176302 2437230 ~ 2437452 (+) True G41453
TU47060 lncRNA upstream 177125 2436404 ~ 2436629 (+) True G41452
TU47057 lncRNA upstream 182617 2430824 ~ 2431137 (+) True G41449
TU47030 lncRNA downstream 8955 2623715 ~ 2626186 (+) True G41423
TU47090 lncRNA downstream 17454 2632214 ~ 2632830 (+) True G41482
TU47041 lncRNA downstream 19343 2634103 ~ 2644385 (+) True G41433
TU47097 lncRNA downstream 85847 2700607 ~ 2700826 (+) True G41488
TU47103 lncRNA downstream 94766 2709526 ~ 2710015 (+) True G41494
CI01000006_02531899_02588907.mRNA mRNA upstream 23991 2531816 ~ 2589763 (+) True CI01000006_02531899_02588907
CI01000006_02490349_02491048.mRNA mRNA upstream 122636 2490349 ~ 2491118 (+) True CI01000006_02490349_02491048
CI01000006_02396895_02399927.mRNA mRNA upstream 213803 2396468 ~ 2399951 (+) True CI01000006_02396895_02399927
CI01000006_02374902_02382000.mRNA mRNA upstream 231353 2374832 ~ 2382401 (+) True CI01000006_02374902_02382000
CI01000006_02274089_02276641.mRNA mRNA upstream 337073 2273891 ~ 2276681 (+) True CI01000006_02274089_02276641
CI01000006_02616480_02616828.mRNA mRNA downstream 1720 2616480 ~ 2616839 (+) True CI01000006_02616480_02616828
CI01000006_02665949_02677083.mRNA mRNA downstream 51189 2665949 ~ 2677215 (+) True CI01000006_02665949_02677083
CI01000006_02774064_02933983.mRNA mRNA downstream 159304 2774064 ~ 2933983 (+) True CI01000006_02774064_02933983
CI01000006_03016090_03016706.mRNA mRNA downstream 400377 3015137 ~ 3017314 (+) True CI01000006_03016090_03016706
CI01000006_03102358_03152576.mRNA mRNA downstream 487598 3102358 ~ 3152869 (+) True CI01000006_03102358_03152576
TU46746 other upstream 917933 1692065 ~ 1695821 (+) True G41170
TU46269 other upstream 2120728 488875 ~ 493026 (+) True G40768
TU46261 other upstream 2130419 480632 ~ 483335 (+) False G40767
TU46274 other upstream 2134560 475465 ~ 479194 (+) True G40772
TU47032 other downstream 30902 2645662 ~ 2660570 (+) True G41424
TU47211 other downstream 221407 2836167 ~ 2839421 (+) True G41591
TU47109 other downstream 1114470 3729230 ~ 3734202 (+) False G41496
TU47105 other downstream 1119338 3734098 ~ 3734202 (+) False G41496
TU47107 other downstream 1119338 3734098 ~ 3734202 (+) False G41496

Expression Profile