RNA id: CI01000009_03261739_03262843.mRNA


Basic Information

Item Value
RNA id CI01000009_03261739_03262843.mRNA
length 1672
RNA type mRNA
GC content 0.42
exon number 2
gene id CI01000009_03261739_03262843
representative False

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3261038 ~ 3262843 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCTCTATGAATCTTGCCACAATAGGCATTGTTGCTGGTTGTATTGCTGGAGCTACAGTGCTCATAATAATCATCATCTGCTGTTGCCGCAAACGGAAACAGAAATCAAAAAAAGTTCCAGTGGTGGAATACCACGACGAACCACAAATAGAATATATTGACGTAGGGAATACATACAACACTGAAGAGAGAACTGACAAAGCTCGAAGTGATGACAGTGGAGGTGACCGTGATGACCTCAGAGATCGCTTCGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATAGGTATGATGATCGCAGAGATCGGTATGATGACCATAGAGATCGCTATAGATAAAATCATTATGCTCAGTATGATAATCACCATGATCAGTGATGAGCCATTTAATTATTATGACAACCATCCAAATTTTCCTACACGGACAATAGCAGTGAGCCAAGGCCTCAGATGGTATCCAGTGTGTATTTTTGTTCTACAGTTGTTCAAACATATAATATGTTTAACTAAATTTTTTTCCTGTGTTGATAATCAAATCAAATTGTGCTTTATCCCTACAGTGTCAAATGATTCTTCTGAGCTGAATGAATCATCCTTTTTTTATTTACTTTTTGTTTTATTTTACAGGATTGTAATAGTATTTTATAAACAGCATATAGTTTTTTGTTGTTGTAATGTCTATCAGCTAAAGTAATTAGGCTACATCACATTTTATTCTTCTGAATCATCTTTTTTTTTTGGGTGGATGTTCAGAATGGTGCTTAACGACGATGACATTTCTCCAATTATTTTGTACATTTCTATATTATTTTAAAAAGCTTTTAACCCTGCATGTTATGTATATGTTAGTTTTTTAAGACAATGAAATAGGCCCTACTTAATTATAATCATAAATTGCAATCTTTATAATTAATTTTTATGAGTGGTTTAAGAGCTGATTAGTACTTTTTTTAGTAATTTTATGGCATAATGTTGGAATTTATAAAAATGGCTAGAACTAATTCATGTTACACACACCTGCTTGTCATAGTTCAAATAAA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU59913 lncRNA downstream 37239 3223490 ~ 3223799 (-) True G52592
TU59914 lncRNA downstream 38077 3222632 ~ 3222961 (-) True G52593
TU59839 lncRNA downstream 39096 3220732 ~ 3221942 (-) True G52521
TU59805 lncRNA downstream 53612 3202765 ~ 3207426 (-) True G52496
TU59800 lncRNA downstream 104892 3150263 ~ 3156146 (-) True G52494
TU59831 lncRNA upstream 15901 3278744 ~ 3279333 (-) True G52513
TU59811 lncRNA upstream 24475 3287318 ~ 3290823 (-) False G52501
TU59812 lncRNA upstream 24475 3287318 ~ 3287926 (-) True G52501
TU59928 lncRNA upstream 38106 3300949 ~ 3302661 (-) True G52606
TU59949 lncRNA upstream 119141 3381984 ~ 3386060 (-) True G52623
CI01000009_03244366_03259106.mRNA mRNA downstream 1932 3243598 ~ 3259106 (-) True CI01000009_03244366_03259106
CI01000009_03235111_03242103.mRNA mRNA downstream 18935 3235014 ~ 3242103 (-) True CI01000009_03235111_03242103
CI01000009_03226613_03234223.mRNA mRNA downstream 26815 3225768 ~ 3234223 (-) True CI01000009_03226613_03234223
CI01000009_03171440_03194494.mRNA mRNA downstream 65893 3171440 ~ 3195145 (-) True CI01000009_03171440_03194494
CI01000009_03140599_03143635.mRNA mRNA downstream 117403 3140599 ~ 3143635 (-) True CI01000009_03140599_03143635
CI01000009_03264437_03267242.mRNA mRNA upstream 1594 3264437 ~ 3267242 (-) True CI01000009_03264437_03267242
CI01000009_03292206_03295043.mRNA mRNA upstream 29363 3292206 ~ 3295043 (-) True CI01000009_03292206_03295043
CI01000009_03306370_03311820.mRNA mRNA upstream 43446 3306289 ~ 3311820 (-) True CI01000009_03306370_03311820
CI01000009_03358707_03369503.mRNA mRNA upstream 95165 3358008 ~ 3369577 (-) True CI01000009_03358707_03369503
CI01000009_03378591_03380390.mRNA mRNA upstream 115716 3378559 ~ 3381365 (-) True CI01000009_03378591_03380390
TU59711 other downstream 361631 2899254 ~ 2899407 (-) True G52415
TU59706 other downstream 698505 2551724 ~ 2562533 (-) True G52410
TU59630 other downstream 1020274 2240693 ~ 2240764 (-) True CI01000009_02239426_02240738
TU60172 other upstream 954577 4217420 ~ 4231469 (-) True G52828
TU60944 other upstream 2239552 5502395 ~ 5505248 (-) False G53515
TU63500 other upstream 5162978 8425821 ~ 8428012 (-) True G55814
TU64878 other upstream 5595309 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU67286 other upstream 9025374 12288217 ~ 12289518 (-) False G59097

Expression Profile