RNA id: TU59814



Basic Information


Item Value
RNA id TU59814
length 482
RNA type TUCP
GC content 0.44
exon number 2
gene id CI01000009_03261739_03262843
representative True

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 3261038 ~ 3262843 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGACCGCAAAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATCGCTACGATGATCGCAGAGGTAGCCGTGATGACCTCAGAGATAGTGTCAAATGATTCTTCTGAGCTGAATGAATCATCCTTTTTTTATTTACTTTTTGTTTTATTTTACAGGATTGTAATAGTATTTTATAAACAGCATATAGTTTTTTGTTGTTGTAATGTCTATCAGCTAAAGTAATTAGGCTACATCACATTTTATTCTTCTGAATCATCTTTTTTTTTTGGGTGGATGTTCAGAATGGTGCTTAACGACGATGACATTTCTCCAATTATTTTGTACATTTCTATATTATTTTAAAAAGCTTTTAACCCTGCATGTTATGTATATGTTAGTTTTTTAAGACAATGAAATAGGCCCT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU59913 lncRNA downstream 37404 3223490 ~ 3223799 (-) True G52592
TU59914 lncRNA downstream 38242 3222632 ~ 3222961 (-) True G52593
TU59839 lncRNA downstream 39261 3220732 ~ 3221942 (-) True G52521
TU59805 lncRNA downstream 53777 3202765 ~ 3207426 (-) True G52496
TU59800 lncRNA downstream 105057 3150263 ~ 3156146 (-) True G52494
TU59831 lncRNA upstream 16787 3278744 ~ 3279333 (-) True G52513
TU59811 lncRNA upstream 25361 3287318 ~ 3290823 (-) False G52501
TU59812 lncRNA upstream 25361 3287318 ~ 3287926 (-) True G52501
TU59928 lncRNA upstream 38992 3300949 ~ 3302661 (-) True G52606
TU59949 lncRNA upstream 120027 3381984 ~ 3386060 (-) True G52623
CI01000009_03244366_03259106.mRNA mRNA downstream 2097 3243598 ~ 3259106 (-) True CI01000009_03244366_03259106
CI01000009_03235111_03242103.mRNA mRNA downstream 19100 3235014 ~ 3242103 (-) True CI01000009_03235111_03242103
CI01000009_03226613_03234223.mRNA mRNA downstream 26980 3225768 ~ 3234223 (-) True CI01000009_03226613_03234223
CI01000009_03171440_03194494.mRNA mRNA downstream 66058 3171440 ~ 3195145 (-) True CI01000009_03171440_03194494
CI01000009_03140599_03143635.mRNA mRNA downstream 117568 3140599 ~ 3143635 (-) True CI01000009_03140599_03143635
CI01000009_03264437_03267242.mRNA mRNA upstream 2480 3264437 ~ 3267242 (-) True CI01000009_03264437_03267242
CI01000009_03292206_03295043.mRNA mRNA upstream 30249 3292206 ~ 3295043 (-) True CI01000009_03292206_03295043
CI01000009_03306370_03311820.mRNA mRNA upstream 44332 3306289 ~ 3311820 (-) True CI01000009_03306370_03311820
CI01000009_03358707_03369503.mRNA mRNA upstream 96051 3358008 ~ 3369577 (-) True CI01000009_03358707_03369503
CI01000009_03378591_03380390.mRNA mRNA upstream 116602 3378559 ~ 3381365 (-) True CI01000009_03378591_03380390
TU59711 other downstream 361796 2899254 ~ 2899407 (-) True G52415
TU59706 other downstream 698670 2551724 ~ 2562533 (-) True G52410
TU59634 other downstream 1020439 2240019 ~ 2240764 (-) False CI01000009_02239426_02240738
TU60172 other upstream 955463 4217420 ~ 4231469 (-) True G52828
TU60944 other upstream 2240438 5502395 ~ 5505248 (-) False G53515
TU63500 other upstream 5163864 8425821 ~ 8428012 (-) True G55814
TU64878 other upstream 5596195 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU67286 other upstream 9026260 12288217 ~ 12289518 (-) False G59097

Expression Profile