Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000009_06130188_06193279.mRNA |
| length | 4998 |
| RNA type | mRNA |
| GC content | 0.50 |
| exon number | 34 |
| gene id | CI01000009_06130188_06193279 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 6130064 ~ 6193404 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0005737 | cytoplasm | cellular_component |
| id | description |
|---|---|
| K08518 | STXBP5, SRO7_77; syntaxin-binding protein 5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU61123 | lncRNA | upstream | 34459 | 6065067 ~ 6095605 (+) | True | G53666 |
| TU61201 | lncRNA | upstream | 84341 | 6045521 ~ 6045723 (+) | True | G53733 |
| TU61191 | lncRNA | upstream | 93635 | 6036196 ~ 6036429 (+) | True | G53723 |
| TU61132 | lncRNA | upstream | 234452 | 5859197 ~ 5895612 (+) | True | G53675 |
| TU61092 | lncRNA | upstream | 284240 | 5844049 ~ 5845824 (+) | False | G53646 |
| TU61118 | lncRNA | downstream | 21669 | 6215073 ~ 6215460 (+) | True | G53661 |
| TU61126 | lncRNA | downstream | 22264 | 6215668 ~ 6244368 (+) | True | G53669 |
| TU61360 | lncRNA | downstream | 326495 | 6519899 ~ 6530269 (+) | True | G53886 |
| TU61364 | lncRNA | downstream | 343745 | 6537149 ~ 6537383 (+) | True | G53890 |
| TU61375 | lncRNA | downstream | 377007 | 6570411 ~ 6570613 (+) | True | G53901 |
| CI01000009_06002120_06017019.mRNA | mRNA | upstream | 112282 | 6002120 ~ 6017782 (+) | True | CI01000009_06002120_06017019 |
| CI01000009_05992944_05994452.mRNA | mRNA | upstream | 135572 | 5992944 ~ 5994492 (+) | True | CI01000009_05992944_05994452 |
| CI01000009_05983361_05989883.mRNA | mRNA | upstream | 139481 | 5983361 ~ 5990583 (+) | True | CI01000009_05983361_05989883 |
| CI01000009_05968963_05974380.mRNA | mRNA | upstream | 155314 | 5967459 ~ 5974750 (+) | True | CI01000009_05968963_05974380 |
| CI01000009_05931829_05943829.mRNA | mRNA | upstream | 186165 | 5931718 ~ 5943899 (+) | False | CI01000009_05931829_05943829 |
| CI01000009_06195742_06204011.mRNA | mRNA | downstream | 2338 | 6195742 ~ 6204349 (+) | True | CI01000009_06195742_06204011 |
| CI01000009_06205817_06207701.mRNA | mRNA | downstream | 12413 | 6205817 ~ 6207711 (+) | True | CI01000009_06205817_06207701 |
| CI01000009_06212264_06213131.mRNA | mRNA | downstream | 18860 | 6212264 ~ 6213815 (+) | True | CI01000009_06212264_06213131 |
| CI01000009_06943591_06952628.mRNA | mRNA | downstream | 748220 | 6941624 ~ 6953067 (+) | True | CI01000009_06943591_06952628 |
| CI01000009_06975071_07009147.mRNA | mRNA | downstream | 781667 | 6975071 ~ 7009417 (+) | True | CI01000009_06975071_07009147 |
| TU61110 | other | upstream | 197263 | 5860302 ~ 5860756 (+) | True | G53655 |
| TU60796 | other | upstream | 591010 | 5522242 ~ 5522356 (+) | False | G53388 |
| TU60791 | other | upstream | 591010 | 5535245 ~ 5538095 (+) | False | G53388 |
| TU58748 | other | upstream | 2922140 | 3202905 ~ 3207924 (+) | True | CI01000009_03202999_03207060 |
| TU58747 | other | upstream | 2922578 | 3202905 ~ 3207486 (+) | False | CI01000009_03202999_03207060 |
| TU61103 | other | downstream | 52160 | 6245564 ~ 6248392 (+) | True | G53651 |
| TU63847 | other | downstream | 2935896 | 9129300 ~ 9130286 (+) | True | G56100 |
| TU64139 | other | downstream | 3659955 | 9853359 ~ 9853515 (+) | True | G56323 |
| TU65813 | other | downstream | 5567382 | 11760786 ~ 11760858 (+) | True | G57782 |
| TU65844 | other | downstream | 5740538 | 11933942 ~ 11935251 (+) | False | G57811 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00074314 | False | 4200 | mRNA | 0.51 | 26 | NC_007120.7 | 27416182 ~ 27649406 (-) |
