RNA id: CI01000009_10355985_10360375.mRNA


Basic Information

Item Value
RNA id CI01000009_10355985_10360375.mRNA
length 1859
RNA type mRNA
GC content 0.45
exon number 9
gene id CI01000009_10355985_10360375
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 10355735 ~ 10360375 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GATTCTTGTTTCCCTCACTCTTCTTCCTGCTTCCATAATGGCTGTTCGTTTTGCAGTGAGCTCTGCAGAAAGGATTGGATTTGGTTTTCTGAGGCCCACGACAGTGACCACGGACATCAGGAGAGGGGCAGTGGGTAATGCTGCTGCTTCTGTCACTGTCCAGGACAGCCACGGGAAGCTCAAGACTGTGGCTGACCTCCCAGAGATCAAAACAATTAGGATACTGTACAAAACGATCCTTAAAGGGTACATGAATCGCATGCATGAGCTGCAGATACATGAAAATCAGCTTTATGGCCCCATGTACAAAGTGAACGTTGGAAAATTACAATCCATTTCAATAAACAGTGTGGACTTACTGGAGGAACTCCTTAGAAAAGACGAGAAGTTTCCTTGCAGAGGAGACATGACTCTGTGGACAGAGTATCGTGACATGAGAGGCATCGGCTACGGCCCTTTCACAGAAGAAGGAGAGAAATGGTACAAACTGCGGGCAGTGCTGAACAAACGCATGCTGCATCCAAAGGAGTCTATTCAGTATGGGGATGTGGTCAATGCGGTGGTCACAGACTTCATCAAACGGGTTTACTATCTGCGGGAAATGAGCCCCACTGGTGATCTTGTCCCTGACTTGACCAATGAGCTTTACCGCTTCTCCCTTGAAGGAATCTCATCCATTCTGTTTGAGACACGCATTGGCTGCCTGGAGAAAGAGATTCCTGCAGAGACACAAGATTTCATTAATTCTATTGCACAAATGTTGAACTACAGCATGCCTGTGGTGGTGCTGCCCAAATGGACTCGCAAATTCTTGCCATTTTGGCAGTGGTACATTAATGGCTGGGAGGGCATATTCAAATTCTCCAGAAAGATGATTGACATGAAGATGGAGGCCATTCAGAGGCGTGTGGATGCAAATCAGGAGGTTGCTGGGGAATATCTCACCTATCTGCTTTCCAATGTTAAGATGAGCAGTAAAGACGTTTATGGAAGCATTTCTGAGCTGCTGTTGGCTGGAGTGGACACAACCTCCAGCACCATAATGTGGGCATTGTATCTCCTCTCAAGAGATCCAGAAGCTCAAGAGGCTCTATATCAGGATATAACCAGAGTCTTAAAGGGCGACAGAGTCCCAACAGCACAGGAAGTGAACAGCATGCCTTACCTCAAAGCTGTCATCAAGGAAACACTAAGGATGTATCCTGTGGTGCCTATGAATTCTCGTCTTATTGCAGAAAATGATGTTGTCATTGGTGGACACTTTTTCCCTAAAAAGACAACGTTCACTCTGTGCCACTATGTAATCAGCCGTGATGAGAAAGTCTTCCCAGAGGCATGGAAGTTCAAACCTGACCGCTGGCTCCGAGATGGCAGAACAAGACCCAACCCTTTTGGGTCAATCCCTTTTGGATTTGGAGTCAGAGGCTGCGTTGGCCGTCGCATTGCTGAATTAGAGATGCATCTGGCTTTGGCAAGGCTAATCAAGTTGTTTGAAATCAGACCGGACCCAACTGTAGGTGAGGTTCAGTCAATCTATCGCTCAGTGCTTGGGCCAGACAGACAGGTTAACCTCCACTTTGTGGAGAGACCGAAGACACATGAAGCATAGCTAAAGAAGACAACTGTTTCAGCAAGACATAAGCTGCATGTGTACATACGAAAATTATCAGCTGAAGTAAATCATGTGATTCTTTATCTCCATTTGAATATGATTCTGTTGTGCTTTGGAATATGCAATATAAAGCACCCTGTATTACACTGTGAAAAATACTTTTTTCCCCACCTAATTTTGTATAGCTCTTTTGCTATTAAATTGTTCTTGTGCAGTGTACATAATGTATTTTATGAACTTCAATAAA

Function

GO:

id name namespace
GO:0004497 monooxygenase activity molecular_function

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU65306 lncRNA downstream 36746 10318719 ~ 10318989 (-) True G57311
TU64969 lncRNA downstream 51267 10303445 ~ 10304468 (-) True G57035
TU65279 lncRNA downstream 57574 10298039 ~ 10298161 (-) True G57287
TU65262 lncRNA downstream 97130 10257887 ~ 10258605 (-) True G57276
TU65226 lncRNA downstream 156316 10190610 ~ 10199419 (-) True G57240
TU65274 lncRNA upstream 79073 10439448 ~ 10442918 (-) True G57283
TU65348 lncRNA upstream 152041 10512416 ~ 10512647 (-) True G57349
TU65419 lncRNA upstream 332970 10693345 ~ 10693675 (-) True G57418
TU65427 lncRNA upstream 361328 10721703 ~ 10722089 (-) True G57426
TU65436 lncRNA upstream 376488 10736863 ~ 10737325 (-) True G57435
CI01000009_10330884_10337327.mRNA mRNA downstream 18408 10330780 ~ 10337327 (-) True CI01000009_10330884_10337327
CI01000009_10305247_10317487.mRNA mRNA downstream 37991 10305177 ~ 10317744 (-) True CI01000009_10305247_10317487
CI01000009_10297628_10300270.mRNA mRNA downstream 54633 10297628 ~ 10301102 (-) False CI01000009_10297628_10300270
CI01000009_10271506_10292564.mRNA mRNA downstream 63171 10270745 ~ 10292564 (-) True CI01000009_10271506_10292564
CI01000009_10261399_10263994.mRNA mRNA downstream 91741 10260600 ~ 10263994 (-) True CI01000009_10261399_10263994
CI01000009_10414678_10421940.mRNA mRNA upstream 53433 10413808 ~ 10421940 (-) True CI01000009_10414678_10421940
CI01000009_10631280_10637275.mRNA mRNA upstream 270711 10631086 ~ 10637275 (-) True CI01000009_10631280_10637275
CI01000009_10762456_10773627.mRNA mRNA upstream 400927 10761302 ~ 10774912 (-) True CI01000009_10762456_10773627
CI01000009_10795119_10827802.mRNA mRNA upstream 434698 10795073 ~ 10827936 (-) True CI01000009_10795119_10827802
CI01000009_10830928_10886836.mRNA mRNA upstream 470553 10830928 ~ 10886836 (-) True CI01000009_10830928_10886836
TU64878 other downstream 1495172 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU63500 other downstream 1927723 8425821 ~ 8428012 (-) True G55814
TU60944 other downstream 4850487 5502395 ~ 5505248 (-) False G53515
TU60172 other downstream 6124266 4217420 ~ 4231469 (-) True G52828
TU59814 other downstream 7093778 3261203 ~ 3261957 (-) True CI01000009_03261739_03262843
TU67286 other upstream 1927842 12288217 ~ 12289518 (-) False G59097
TU67287 other upstream 1927842 12288217 ~ 12288977 (-) True G59097
TU67750 other upstream 3615013 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67748 other upstream 3673189 14033564 ~ 14037873 (-) True G59490
TU68092 other upstream 4502022 14862397 ~ 14887464 (-) True G59811

Expression Profile