Gene
RNA
| Item | Value |
|---|---|
| RNA id | CI01000009_14380226_14386430.mRNA |
| length | 1676 |
| RNA type | mRNA |
| GC content | 0.49 |
| exon number | 5 |
| gene id | CI01000009_14380226_14386430 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 14380226 ~ 14386866 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0016567 | protein ubiquitination | biological_process |
| id | description |
|---|---|
| K10323 | ASB1; ankyrin repeat and SOCS box protein 1 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU66577 | lncRNA | upstream | 102671 | 14264923 ~ 14277555 (+) | True | CI01000009_14264935_14273006 |
| TU66580 | lncRNA | upstream | 178380 | 14198638 ~ 14201846 (+) | True | G58452 |
| TU66619 | lncRNA | upstream | 223995 | 14125320 ~ 14156231 (+) | True | G58489 |
| TU66595 | lncRNA | upstream | 282523 | 14097491 ~ 14097703 (+) | True | G58467 |
| TU66536 | lncRNA | upstream | 328822 | 14050977 ~ 14051404 (+) | True | G58421 |
| TU66575 | lncRNA | downstream | 6948 | 14393814 ~ 14402390 (+) | True | G58447 |
| TU66582 | lncRNA | downstream | 15783 | 14402649 ~ 14403582 (+) | True | G58454 |
| TU66574 | lncRNA | downstream | 82668 | 14469534 ~ 14471771 (+) | True | G58446 |
| TU66692 | lncRNA | downstream | 110070 | 14496936 ~ 14500246 (+) | False | G58558 |
| TU66693 | lncRNA | downstream | 110183 | 14497049 ~ 14500246 (+) | False | G58558 |
| CI01000009_14348389_14374515.mRNA | mRNA | upstream | 4543 | 14348389 ~ 14375683 (+) | True | CI01000009_14348389_14374515 |
| CI01000009_14296451_14314340.mRNA | mRNA | upstream | 65877 | 14296451 ~ 14314349 (+) | True | CI01000009_14296451_14314340 |
| CI01000009_14264935_14273006.mRNA | mRNA | upstream | 106497 | 14263423 ~ 14273729 (+) | False | CI01000009_14264935_14273006 |
| CI01000009_14242224_14243004.mRNA | mRNA | upstream | 136502 | 14242117 ~ 14243724 (+) | True | CI01000009_14242224_14243004 |
| CI01000009_14170062_14192930.mRNA | mRNA | upstream | 186894 | 14169221 ~ 14193332 (+) | True | CI01000009_14170062_14192930 |
| CI01000009_14432830_14450364.mRNA | mRNA | downstream | 45850 | 14432716 ~ 14451542 (+) | True | CI01000009_14432830_14450364 |
| CI01000009_14474300_14474593.mRNA | mRNA | downstream | 87434 | 14474300 ~ 14474770 (+) | False | CI01000009_14474300_14474593 |
| CI01000009_14581261_14582899.mRNA | mRNA | downstream | 194014 | 14580880 ~ 14582994 (+) | True | CI01000009_14581261_14582899 |
| CI01000009_14595691_14611767.mRNA | mRNA | downstream | 208570 | 14595436 ~ 14612569 (+) | False | CI01000009_14595691_14611767 |
| CI01000009_14616605_14620028.mRNA | mRNA | downstream | 228505 | 14615371 ~ 14620238 (+) | True | CI01000009_14616605_14620028 |
| TU66583 | other | upstream | 121700 | 14246695 ~ 14258526 (+) | True | G58455 |
| TU66469 | other | upstream | 340325 | 14039798 ~ 14039901 (+) | True | G58382 |
| TU66462 | other | upstream | 340325 | 14039757 ~ 14039901 (+) | True | G58382 |
| TU66091 | other | upstream | 1236618 | 13140378 ~ 13143608 (+) | True | G58028 |
| TU65732 | other | upstream | 1357088 | 13006643 ~ 13023138 (+) | True | G57701 |
| TU66694 | other | downstream | 110070 | 14496936 ~ 14500423 (+) | False | G58558 |
| TU66695 | other | downstream | 110183 | 14497049 ~ 14501514 (+) | True | G58558 |
| TU66789 | other | downstream | 262858 | 14649724 ~ 14652022 (+) | True | G58649 |
| TU66854 | other | downstream | 379793 | 14766659 ~ 14773773 (+) | False | G58711 |
| TU66856 | other | downstream | 381074 | 14767940 ~ 14771757 (+) | True | G58711 |
| species | RNA id | representative | length | rna type | GC content | exon number | chromosome id | location |
|---|---|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | TCONS_00073598 | True | 1314 | mRNA | 0.49 | 5 | NC_007120.7 | 45680802 ~ 45697644 (+) |
