Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU67860 |
| length | 4100 |
| lncRNA type | sense_over |
| GC content | 0.41 |
| exon number | 2 |
| gene id | CI01000009_14476688_14573629 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | CI01000009 |
| NCBI id | null |
| chromosome length | 16003125 |
| location | 14475724 ~ 14573629 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| species | grasscarp (Ctenopharyngodon idella) |
| id | name | namespace |
|---|---|---|
| GO:0000118 | histone deacetylase complex | cellular_component |
| id | description |
|---|---|
| K11406 | HDAC4_5; histone deacetylase 4/5 |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU67870 | lncRNA | downstream | 267969 | 14164892 ~ 14214853 (-) | True | G59602 |
| TU67904 | lncRNA | downstream | 281822 | 14199911 ~ 14201000 (-) | True | G59636 |
| TU67894 | lncRNA | downstream | 293659 | 14188385 ~ 14189163 (-) | True | G59626 |
| TU67878 | lncRNA | downstream | 306378 | 14176003 ~ 14176444 (-) | True | G59610 |
| TU67810 | lncRNA | downstream | 406989 | 14075624 ~ 14075833 (-) | True | G59552 |
| TU67858 | lncRNA | upstream | 127083 | 14614098 ~ 14711193 (-) | True | G59590 |
| TU67851 | lncRNA | upstream | 195854 | 14682869 ~ 14684152 (-) | True | G59583 |
| TU68031 | lncRNA | upstream | 229103 | 14716118 ~ 14716332 (-) | True | G59754 |
| TU68045 | lncRNA | upstream | 249002 | 14736017 ~ 14736281 (-) | True | G59768 |
| TU68074 | lncRNA | upstream | 327064 | 14814079 ~ 14814284 (-) | True | G59794 |
| CI01000009_14342067_14344332.mRNA | mRNA | downstream | 137888 | 14341987 ~ 14344934 (-) | True | CI01000009_14342067_14344332 |
| CI01000009_14248805_14255014.mRNA | mRNA | downstream | 227047 | 14247643 ~ 14255775 (-) | True | CI01000009_14248805_14255014 |
| CI01000009_14201347_14205288.mRNA | mRNA | downstream | 276935 | 14201115 ~ 14205887 (-) | True | CI01000009_14201347_14205288 |
| CI01000009_14052206_14053489.mRNA | mRNA | downstream | 428869 | 14051969 ~ 14053953 (-) | True | CI01000009_14052206_14053489 |
| CI01000009_14012800_14024940.mRNA | mRNA | downstream | 457591 | 14011950 ~ 14025231 (-) | True | CI01000009_14012800_14024940 |
| CI01000009_14626182_14652953.mRNA | mRNA | upstream | 138816 | 14625831 ~ 14653259 (-) | True | CI01000009_14626182_14652953 |
| CI01000009_14763341_14773678.mRNA | mRNA | upstream | 276197 | 14763212 ~ 14773681 (-) | True | CI01000009_14763341_14773678 |
| CI01000009_14776978_14779978.mRNA | mRNA | upstream | 289844 | 14776859 ~ 14781953 (-) | True | CI01000009_14776978_14779978 |
| CI01000009_14905408_14907785.mRNA | mRNA | upstream | 417474 | 14904489 ~ 14908077 (-) | True | CI01000009_14905408_14907785 |
| CI01000009_14961220_14973307.mRNA | mRNA | upstream | 473965 | 14960980 ~ 14973405 (-) | True | CI01000009_14961220_14973307 |
| TU67748 | other | downstream | 444949 | 14033564 ~ 14037873 (-) | True | G59490 |
| TU67750 | other | downstream | 504208 | 13975388 ~ 13978614 (-) | True | CI01000009_13975122_13976026 |
| TU67286 | other | downstream | 2193304 | 12288217 ~ 12289518 (-) | False | G59097 |
| TU67287 | other | downstream | 2193845 | 12288217 ~ 12288977 (-) | True | G59097 |
| TU64878 | other | downstream | 5622259 | 8858152 ~ 8860563 (-) | True | CI01000009_08858198_08860555 |
| TU68092 | other | upstream | 375382 | 14862397 ~ 14887464 (-) | True | G59811 |
| TU68236 | other | upstream | 645089 | 15132104 ~ 15132503 (-) | True | G59941 |
| TU68714 | other | upstream | 889245 | 15376260 ~ 15443047 (-) | True | G60362 |
| TU68711 | other | upstream | 1159760 | 15646775 ~ 15651888 (-) | True | G60359 |
