RNA id: CI01000009_14682045_14685381.mRNA



Basic Information


Item Value
RNA id CI01000009_14682045_14685381.mRNA
length 1267
RNA type mRNA
GC content 0.47
exon number 2
gene id CI01000009_14682045_14685381
representative True

Chromosome Information


Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14681654 ~ 14685420 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


AAATAAATTGGCCCTCATTTGTCTAAGACAAGGACAACTCTTAGACTTTACAAATCCAGGCCTTGGCTTTCGGCAGATTAAAGAGCCCAGAGAGACCTGTGGCTAGATCTCTGCTAATAAAATTTGGGTGTTAAATAAACTGCGCTAGCGCCTCAAAGGGCCTGTAGAGCCCTAACTAGCGCTGGCCAGGCTTCAGTCACAACCCGGCCTGTCTTTGTGTTTATGTTCGAAGCAGGAGAGTTGCCTTCATGACGATTTATTGACGCAAGATCCCCACAGTTCAGTCTGCCAGCAATTAATCATGGGGCTTGTTTGGGCCTGTGAGAGCGATCTCCCCACAACCTGAGCCAGGAGACTAACCTACTTGTGAGATCAACACAACGCTTGATCAATGGAACAAAACTACCACCCAAAATCTGTTACCAGCAAAGAATATATGATCTGCCATCCTTCAACACCAAACAACACTTCCTCTTGCTGGAAAATAATTGAGCTTCATGACAGAAATGATGTTTACACAACTTACATGTTCCTCCATGAGCATGTGACGTGGCAAACAGTCGCGTTTCTGAGGAAAAGGACCCTGAGAAACCAGATAAAAATAGGTTTCATGATGAAAGACCACTCCTATATCATTTGCTTTTCTATCAACAGAGGTTCCCAGAGCATGGGATCCCTTCATGAGAACACTGGGTTCTTTCACGTGAGAGGATTATGGGTTACGACTTCTCAAGAGCTATTCTCAGACTCAATGGTGGCAGTAATACTGCATAAACACAGATTGACTAAGGAGCAGGCAGGTTTGCAGCTGCACAGCCCGACTAAAAACAGTGACAGACCGCGATTACGAGTCTGCTGTAGGGGAGCTCGGTACACTGGCGTCTGCATCTGGATCAAGTTGCGTTCCCCATCCTGCTGCCCTGGGGCAAACACACCATTAGTGCCAGTTGTTTGGAGCAGTAAAGCCTGCAGACTAGCAGCCATGATGTCAGCCTTCTGGGCTAAACTGGGCAGTCCATGCAACGGGGTACAGAGAAAACAAAACAAAAATATCAAACAATGGGCTCCATCGCCCAGTAACTCAACAGAATGGAACAGCCTGATATTCCCAAAGGAAGTCTGGACTTTGATACGGCCGGATCAAAAACCTGTTTGCCGATCCAGAAGGTCTGGAGAGAAACTAAAGTACATCAAGCCGTCCACGTTCAAATGCACGGAGGGCCAATGAGATCTCCCAGCCTCAGGCAAAAGCTTCTGAGGTACTGAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU66710 lncRNA upstream 5281 14610902 ~ 14676373 (+) True G58572
TU66771 lncRNA upstream 72313 14609006 ~ 14609341 (+) True G58631
TU66770 lncRNA upstream 73588 14607086 ~ 14608066 (+) True G58630
TU66769 lncRNA upstream 74877 14606158 ~ 14606777 (+) True CI01000009_14595691_14611767
TU66763 lncRNA upstream 83172 14598267 ~ 14598482 (+) True G58623
TU66816 lncRNA downstream 19059 14704479 ~ 14710140 (+) True G58676
TU66826 lncRNA downstream 35468 14720888 ~ 14721094 (+) True G58686
TU66861 lncRNA downstream 78402 14763822 ~ 14764679 (+) True G58713
TU66838 lncRNA downstream 90517 14775937 ~ 14777316 (+) True G58695
TU66884 lncRNA downstream 127596 14813016 ~ 14813280 (+) True G58735
CI01000009_14659692_14664324.mRNA mRNA upstream 17321 14659179 ~ 14664333 (+) True CI01000009_14659692_14664324
CI01000009_14616605_14620028.mRNA mRNA upstream 61416 14615371 ~ 14620238 (+) True CI01000009_14616605_14620028
CI01000009_14595691_14611767.mRNA mRNA upstream 69085 14595436 ~ 14612569 (+) False CI01000009_14595691_14611767
CI01000009_14581261_14582899.mRNA mRNA upstream 98660 14580880 ~ 14582994 (+) True CI01000009_14581261_14582899
CI01000009_14474300_14474593.mRNA mRNA upstream 206884 14474300 ~ 14474770 (+) False CI01000009_14474300_14474593
CI01000009_14857765_14859526.mRNA mRNA downstream 172293 14857713 ~ 14859636 (+) False CI01000009_14857765_14859526
CI01000009_14862429_14898325.mRNA mRNA downstream 176312 14861732 ~ 14898549 (+) True CI01000009_14862429_14898325
CI01000009_14916323_14920716.mRNA mRNA downstream 230845 14916265 ~ 14920795 (+) True CI01000009_14916323_14920716
CI01000009_14925314_14952223.mRNA mRNA downstream 239201 14924621 ~ 14952571 (+) False CI01000009_14925314_14952223
CI01000009_14976078_14977321.mRNA mRNA downstream 290351 14975771 ~ 14977424 (+) True CI01000009_14976078_14977321
TU66789 other upstream 29632 14649724 ~ 14652022 (+) True G58649
TU66695 other upstream 180140 14497049 ~ 14501514 (+) True G58558
TU66694 other upstream 181231 14496936 ~ 14500423 (+) False G58558
TU66583 other upstream 423128 14246695 ~ 14258526 (+) True G58455
TU66462 other upstream 641753 14039757 ~ 14039901 (+) True G58382
TU66854 other downstream 81239 14766659 ~ 14773773 (+) False G58711
TU66856 other downstream 82520 14767940 ~ 14771757 (+) True G58711
TU66845 other downstream 133799 14819219 ~ 14837553 (+) True G58702
TU66834 other downstream 239809 14955242 ~ 14955795 (+) True G58694
TU68340 other downstream 666627 15352047 ~ 15376169 (+) False G60028

Expression Profile