RNA id: TU67429


Basic Information

Item Value
RNA id TU67429
length 357
lncRNA type antisense_over
GC content 0.36
exon number 1
gene id G59224
representative False

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 12432563 ~ 12433051 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTGAAGTGTCCACGGTTTTGATCCAATTTCTGAGTTCAGGAGAAATTTCATTCACATCATCATCTTTCAGCAAAATCAGAAAATCTCGACACACATTTTCACCTTTTCCAAGGATGATGTCCAAAAGTTTAACAACCCTATCTCTGGGAACTGTCACAGACTTCAGTTCATCGTACTCCGGCATTGTTATAAGTTCTTTAGCTTGAACATGTTGCAAAATATGCATTAAATCCACACTAAGCCATTTGATGAGCTTAGGTTTGTTATTCAAAATGACTTTATTCATTTTCTACAACAGGTTTACGCCACAACCTTGTATTGACTTAATAAATACCGTAGACAGACTTTACTTTCGAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU67425 lncRNA downstream 4199 12428137 ~ 12428364 (-) True G59220
TU67418 lncRNA downstream 21421 12410917 ~ 12411142 (-) True G59213
TU67414 lncRNA downstream 25460 12406796 ~ 12407103 (-) True G59209
TU67411 lncRNA downstream 30642 12401604 ~ 12401921 (-) True G59206
TU67391 lncRNA downstream 39031 12393247 ~ 12393532 (-) True G59200
TU67436 lncRNA upstream 14040 12446959 ~ 12447178 (-) True G59230
TU67451 lncRNA upstream 37117 12470036 ~ 12470265 (-) True G59245
TU67461 lncRNA upstream 108619 12541538 ~ 12542357 (-) True G59255
TU67519 lncRNA upstream 161812 12594731 ~ 12597373 (-) True G59295
TU67524 lncRNA upstream 186470 12619389 ~ 12619594 (-) True G59300
CI01000009_12304891_12322499.mRNA mRNA downstream 109639 12304689 ~ 12322924 (-) True CI01000009_12304891_12322499
CI01000009_12176488_12184112.mRNA mRNA downstream 246903 12176154 ~ 12185660 (-) True CI01000009_12176488_12184112
CI01000009_12167744_12175422.mRNA mRNA downstream 257141 12167744 ~ 12175422 (-) True CI01000009_12167744_12175422
CI01000009_12152712_12167719.mRNA mRNA downstream 264844 12152465 ~ 12167719 (-) True CI01000009_12152712_12167719
CI01000009_12007202_12021667.mRNA mRNA downstream 410526 12006768 ~ 12022037 (-) True CI01000009_12007202_12021667
CI01000009_12486758_12498650.mRNA mRNA upstream 52707 12485626 ~ 12498650 (-) True CI01000009_12486758_12498650
CI01000009_12531562_12540003.mRNA mRNA upstream 98206 12531125 ~ 12540373 (-) True CI01000009_12531562_12540003
CI01000009_12643324_12643737.mRNA mRNA upstream 210342 12643261 ~ 12643988 (-) True CI01000009_12643324_12643737
CI01000009_12659018_12693857.mRNA mRNA upstream 225444 12658363 ~ 12694684 (-) True CI01000009_12659018_12693857
CI01000009_12711691_12713525.mRNA mRNA upstream 278662 12711581 ~ 12713525 (-) True CI01000009_12711691_12713525
TU67286 other downstream 143045 12288217 ~ 12289518 (-) False G59097
TU67287 other downstream 143586 12288217 ~ 12288977 (-) True G59097
TU64878 other downstream 3572000 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU63500 other downstream 4004551 8425821 ~ 8428012 (-) True G55814
TU60944 other downstream 6927315 5502395 ~ 5505248 (-) False G53515
TU67750 other upstream 1542469 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67748 other upstream 1600645 14033564 ~ 14037873 (-) True G59490
TU68092 other upstream 2429478 14862397 ~ 14887464 (-) True G59811
TU68236 other upstream 2699185 15132104 ~ 15132503 (-) True G59941
TU68714 other upstream 2943341 15376260 ~ 15443047 (-) True G60362

Expression Profile