RNA id: TU67528


Basic Information

Item Value
RNA id TU67528
length 345
lncRNA type inter_gene
GC content 0.30
exon number 1
gene id G59304
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 12630813 ~ 12631157 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CTCCCTTTTCATTTTCATTTTTCCCCCCATTTATTTTCCTTTTCAACATTAGAATAAACAATTGGCACCATCTTGCAACTCAAAATGTAGTAACTGTAGTAACACTGTAGTAAATGACCAACACTCTTAAAAATAGAGGTTCCAAAAGGGAGTTTAAATAACGTCACAGAAGAACCATTTTTTGGTTTCCCAAAGAACCTTTCAGTAATTGGTTCTTAATAAGAACCATTTTTTTCTTAGTGTGAATAATATTTTAATAATCAAAACTTTTTCTACAATAAAGAAGAATGTTAAGATGTTAAAAGTTCTTTATGGAACCATCGATGCCAATTAAGAACAGCAAAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU67527 lncRNA downstream 3189 12627389 ~ 12627624 (-) True G59303
TU67526 lncRNA downstream 4654 12625908 ~ 12626159 (-) True G59302
TU67525 lncRNA downstream 8221 12622250 ~ 12622592 (-) True G59301
TU67524 lncRNA downstream 11219 12619389 ~ 12619594 (-) True G59300
TU67519 lncRNA downstream 33440 12594731 ~ 12597373 (-) True G59295
TU67500 lncRNA upstream 479478 13110635 ~ 13198396 (-) True G59276
TU67508 lncRNA upstream 515465 13159129 ~ 13159386 (-) True G59284
TU67504 lncRNA upstream 531719 13162876 ~ 13184488 (-) True G59280
TU67499 lncRNA upstream 567345 13198502 ~ 13206604 (-) True G59275
TU67498 lncRNA upstream 575925 13207082 ~ 13225362 (-) True G59274
CI01000009_12531562_12540003.mRNA mRNA downstream 90440 12531125 ~ 12540373 (-) True CI01000009_12531562_12540003
CI01000009_12486758_12498650.mRNA mRNA downstream 132163 12485626 ~ 12498650 (-) True CI01000009_12486758_12498650
CI01000009_12304891_12322499.mRNA mRNA downstream 307889 12304689 ~ 12322924 (-) True CI01000009_12304891_12322499
CI01000009_12176488_12184112.mRNA mRNA downstream 445153 12176154 ~ 12185660 (-) True CI01000009_12176488_12184112
CI01000009_12167744_12175422.mRNA mRNA downstream 455391 12167744 ~ 12175422 (-) True CI01000009_12167744_12175422
CI01000009_12643324_12643737.mRNA mRNA upstream 12104 12643261 ~ 12643988 (-) True CI01000009_12643324_12643737
CI01000009_12659018_12693857.mRNA mRNA upstream 27206 12658363 ~ 12694684 (-) True CI01000009_12659018_12693857
CI01000009_12711691_12713525.mRNA mRNA upstream 80424 12711581 ~ 12713525 (-) True CI01000009_12711691_12713525
CI01000009_12715240_12852745.mRNA mRNA upstream 84083 12715240 ~ 12852811 (-) True CI01000009_12715240_12852745
CI01000009_12863333_13023317.mRNA mRNA upstream 231463 12862620 ~ 13023317 (-) True CI01000009_12863333_13023317
TU67286 other downstream 341295 12288217 ~ 12289518 (-) False G59097
TU67287 other downstream 341836 12288217 ~ 12288977 (-) True G59097
TU64878 other downstream 3770250 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU63500 other downstream 4202801 8425821 ~ 8428012 (-) True G55814
TU60944 other downstream 7125565 5502395 ~ 5505248 (-) False G53515
TU67750 other upstream 1344231 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67748 other upstream 1402407 14033564 ~ 14037873 (-) True G59490
TU68092 other upstream 2231240 14862397 ~ 14887464 (-) True G59811
TU68236 other upstream 2500947 15132104 ~ 15132503 (-) True G59941
TU68714 other upstream 2745103 15376260 ~ 15443047 (-) True G60362

Expression Profile