RNA id: TU66759


Basic Information

Item Value
RNA id TU66759
length 378
lncRNA type inter_gene
GC content 0.36
exon number 1
gene id G58619
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14590301 ~ 14590678 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GTGAGCGTGGAAAGATGCATTTGGTGAGTGCACACTATCTAGTGGACTTTGTTTGGACCCTCCTGATGACGAAAATTATGCCACGTGGACAGCGTGCGGACCGCCGCGGAACGCGAAAGGGCCGAAGTATACTTTGGGTTTTAAATTTAAAAAAAATTATTCTTATGAACTGATTCTTTTTATTTAAACTAAACATACAGCCCAACCAGTCTAGTTTGATTAAAAAAATAATAATAATAAATTATTCGAATGAACTGATTCTTTTTAGTTAAACAGAAACCTAGACCCCAATTAGTGTAGTTTCATTCCAGGAAAAATGATTCTTAAGAACTGATACTATTCCGTGAAACAAAAACATACAGCCCAATCAGTGCATAT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU66758 lncRNA upstream 145 14589691 ~ 14590156 (+) True G58618
TU66756 lncRNA upstream 3715 14586121 ~ 14586586 (+) True G58616
TU66755 lncRNA upstream 4391 14585690 ~ 14585910 (+) True G58615
TU66754 lncRNA upstream 4695 14585315 ~ 14585606 (+) True G58614
TU66753 lncRNA upstream 5020 14585056 ~ 14585281 (+) True G58613
TU66760 lncRNA downstream 1975 14592653 ~ 14592886 (+) True G58620
TU66761 lncRNA downstream 6407 14597085 ~ 14597411 (+) True G58621
TU66762 lncRNA downstream 6911 14597589 ~ 14597902 (+) True G58622
TU66763 lncRNA downstream 7589 14598267 ~ 14598482 (+) True G58623
TU66769 lncRNA downstream 15480 14606158 ~ 14606777 (+) True CI01000009_14595691_14611767
CI01000009_14581261_14582899.mRNA mRNA upstream 7307 14580880 ~ 14582994 (+) True CI01000009_14581261_14582899
CI01000009_14474300_14474593.mRNA mRNA upstream 115531 14474300 ~ 14474770 (+) False CI01000009_14474300_14474593
CI01000009_14432830_14450364.mRNA mRNA upstream 138759 14432716 ~ 14451542 (+) True CI01000009_14432830_14450364
CI01000009_14380226_14386430.mRNA mRNA upstream 203435 14380226 ~ 14386866 (+) True CI01000009_14380226_14386430
CI01000009_14348389_14374515.mRNA mRNA upstream 214618 14348389 ~ 14375683 (+) True CI01000009_14348389_14374515
CI01000009_14595691_14611767.mRNA mRNA downstream 4758 14595436 ~ 14612569 (+) False CI01000009_14595691_14611767
CI01000009_14616605_14620028.mRNA mRNA downstream 24693 14615371 ~ 14620238 (+) True CI01000009_14616605_14620028
CI01000009_14659692_14664324.mRNA mRNA downstream 68501 14659179 ~ 14664333 (+) True CI01000009_14659692_14664324
CI01000009_14682045_14685381.mRNA mRNA downstream 90976 14681654 ~ 14685420 (+) True CI01000009_14682045_14685381
CI01000009_14857765_14859526.mRNA mRNA downstream 267035 14857713 ~ 14859636 (+) False CI01000009_14857765_14859526
TU66695 other upstream 88787 14497049 ~ 14501514 (+) True G58558
TU66694 other upstream 89878 14496936 ~ 14500423 (+) False G58558
TU66583 other upstream 331775 14246695 ~ 14258526 (+) True G58455
TU66469 other upstream 550400 14039798 ~ 14039901 (+) True G58382
TU66789 other downstream 59046 14649724 ~ 14652022 (+) True G58649
TU66854 other downstream 175981 14766659 ~ 14773773 (+) False G58711
TU66856 other downstream 177262 14767940 ~ 14771757 (+) True G58711
TU66845 other downstream 228541 14819219 ~ 14837553 (+) True G58702
TU66834 other downstream 334551 14955242 ~ 14955795 (+) True G58694

Expression Profile