RNA id: TU68045


Basic Information

Item Value
RNA id TU68045
length 265
lncRNA type inter_gene
GC content 0.32
exon number 1
gene id G59768
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 14736017 ~ 14736281 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGAAATCAGAATCAACAATATTAATCTTTGCAATGCAGAGGAAACACAGGATCTGCATCTGAAGTGCCATGCATTTACACACTGTTTAATGCAGCTCAGAGCTGACAAATGCATTTTAACTGCAGTTACAAATGCATAAATAATGTTTTGATGTTTTAAACATAAAATGTTGAATATTGATATTTTGAAATGATTTAAAGAATAAAAAGATGTGAAATTAAAACCGCCAGTAGGTGGCAGCAAGTCAGTGTTAATAAGTGAGTCA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68031 lncRNA downstream 19685 14716118 ~ 14716332 (-) True G59754
TU67858 lncRNA downstream 24824 14614098 ~ 14711193 (-) True G59590
TU67851 lncRNA downstream 51865 14682869 ~ 14684152 (-) True G59583
TU67860 lncRNA downstream 249002 14482822 ~ 14487015 (-) True CI01000009_14476688_14573629
TU67904 lncRNA downstream 535017 14199911 ~ 14201000 (-) True G59636
TU68074 lncRNA upstream 77798 14814079 ~ 14814284 (-) True G59794
TU68104 lncRNA upstream 152795 14889076 ~ 14891213 (-) False G59818
TU68101 lncRNA upstream 153956 14890237 ~ 14891213 (-) True G59818
TU68108 lncRNA upstream 240408 14976689 ~ 14977258 (-) True G59821
TU68190 lncRNA upstream 354673 15090954 ~ 15091746 (-) True G59898
CI01000009_14626182_14652953.mRNA mRNA downstream 82758 14625831 ~ 14653259 (-) True CI01000009_14626182_14652953
CI01000009_14476688_14573629.mRNA mRNA downstream 162388 14475724 ~ 14573629 (-) False CI01000009_14476688_14573629
CI01000009_14342067_14344332.mRNA mRNA downstream 391083 14341987 ~ 14344934 (-) True CI01000009_14342067_14344332
CI01000009_14248805_14255014.mRNA mRNA downstream 480242 14247643 ~ 14255775 (-) True CI01000009_14248805_14255014
CI01000009_14201347_14205288.mRNA mRNA downstream 530130 14201115 ~ 14205887 (-) True CI01000009_14201347_14205288
CI01000009_14763341_14773678.mRNA mRNA upstream 26931 14763212 ~ 14773681 (-) True CI01000009_14763341_14773678
CI01000009_14776978_14779978.mRNA mRNA upstream 40578 14776859 ~ 14781953 (-) True CI01000009_14776978_14779978
CI01000009_14905408_14907785.mRNA mRNA upstream 168208 14904489 ~ 14908077 (-) True CI01000009_14905408_14907785
CI01000009_14961220_14973307.mRNA mRNA upstream 224699 14960980 ~ 14973405 (-) True CI01000009_14961220_14973307
CI01000009_14974529_14974816.mRNA mRNA upstream 237761 14974042 ~ 14975420 (-) True CI01000009_14974529_14974816
TU67748 other downstream 698144 14033564 ~ 14037873 (-) True G59490
TU67750 other downstream 757403 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67286 other downstream 2446499 12288217 ~ 12289518 (-) False G59097
TU67287 other downstream 2447040 12288217 ~ 12288977 (-) True G59097
TU64878 other downstream 5875454 8858152 ~ 8860563 (-) True CI01000009_08858198_08860555
TU68092 other upstream 126116 14862397 ~ 14887464 (-) True G59811
TU68236 other upstream 395823 15132104 ~ 15132503 (-) True G59941
TU68714 other upstream 639979 15376260 ~ 15443047 (-) True G60362
TU68711 other upstream 910494 15646775 ~ 15651888 (-) True G60359

Expression Profile