RNA id: TU68190


Basic Information

Item Value
RNA id TU68190
length 261
lncRNA type inter_gene
GC content 0.40
exon number 2
gene id G59898
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15090954 ~ 15091746 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCCCTATCGACAACAGGACACTTTCATTTTAATGCATTGTTCCCTTTTATCTTCGTCATATTTCGGGTTTCGTGTAGCTTAATTGGCAGAGCATTGCAATAACAATATGCAATCATGTGATCATGCGATCGTGGGTTCGATCCCAGGGAACGCATGTGCTCATAAAGAGTATATGCACTATAAATCACTAAGGGTAGGTTTAGGGATGGGGTGGGTGTAGTCGTTAAAAAAAAAATGAGTTTTGCTAAATGGAAATAGGAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68108 lncRNA downstream 113696 14976689 ~ 14977258 (-) True G59821
TU68104 lncRNA downstream 199741 14889076 ~ 14891213 (-) False G59818
TU68101 lncRNA downstream 199741 14890237 ~ 14891213 (-) True G59818
TU68074 lncRNA downstream 276670 14814079 ~ 14814284 (-) True G59794
TU68045 lncRNA downstream 354673 14736017 ~ 14736281 (-) True G59768
TU68191 lncRNA upstream 728 15092474 ~ 15092737 (-) True G59899
TU68208 lncRNA upstream 10857 15102603 ~ 15102820 (-) True G59913
TU68222 lncRNA upstream 22013 15113759 ~ 15113970 (-) True G59927
TU68232 lncRNA upstream 37089 15128835 ~ 15129131 (-) True G59937
TU68235 lncRNA upstream 39863 15131609 ~ 15131869 (-) True G59940
CI01000009_14974529_14974816.mRNA mRNA downstream 115534 14974042 ~ 14975420 (-) True CI01000009_14974529_14974816
CI01000009_14961220_14973307.mRNA mRNA downstream 117549 14960980 ~ 14973405 (-) True CI01000009_14961220_14973307
CI01000009_14905408_14907785.mRNA mRNA downstream 182877 14904489 ~ 14908077 (-) True CI01000009_14905408_14907785
CI01000009_14776978_14779978.mRNA mRNA downstream 309001 14776859 ~ 14781953 (-) True CI01000009_14776978_14779978
CI01000009_14763341_14773678.mRNA mRNA downstream 317273 14763212 ~ 14773681 (-) True CI01000009_14763341_14773678
CI01000009_15229965_15235247.mRNA mRNA upstream 137911 15229657 ~ 15235528 (-) True CI01000009_15229965_15235247
CI01000009_15301177_15304489.mRNA mRNA upstream 209351 15301097 ~ 15304500 (-) True CI01000009_15301177_15304489
CI01000009_15318811_15390382.mRNA mRNA upstream 227065 15318811 ~ 15390382 (-) False CI01000009_15318811_15390382
CI01000009_15483720_15484321.mRNA mRNA upstream 391963 15483709 ~ 15484321 (-) True CI01000009_15483720_15484321
CI01000009_15504401_15585060.mRNA mRNA upstream 412600 15504346 ~ 15585829 (-) False CI01000009_15504401_15585060
TU68092 other downstream 203490 14862397 ~ 14887464 (-) True G59811
TU67748 other downstream 1053081 14033564 ~ 14037873 (-) True G59490
TU67750 other downstream 1112340 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67286 other downstream 2801436 12288217 ~ 12289518 (-) False G59097
TU68236 other upstream 40358 15132104 ~ 15132503 (-) True G59941
TU68714 other upstream 284514 15376260 ~ 15443047 (-) True G60362
TU68711 other upstream 555029 15646775 ~ 15651888 (-) True G60359

Expression Profile