RNA id: TU68771


Basic Information

Item Value
RNA id TU68771
length 324
lncRNA type inter_gene
GC content 0.35
exon number 1
gene id G60418
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15274789 ~ 15275112 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CCGATTCCAAAAAAGTTGGGACACTGTACAAATTGTGAATAAAACAGGAATGCAATGATGTGGAAGTTTCAAATTTCAATATTTTATTCAGAATACAACATAGATGACATATCAAATGTTTAAACTGAGAAAATGTATCATTTTAAGGGAAAAATAAGTTGATTTTAAATTTCATGGCATCAACACATCTCAAAAAAGTTGGGACAAGGCAATGTTTACCACTGTGTGGCATCCCCTCTTCTTTTTATAACAGTCTGCAAACGTCTGGGGACTGAGGAGACAAGTTGCTCAAGTTTAGGAATAGGAATGTTGTCCCATTCTTGT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68737 lncRNA downstream 57509 15217079 ~ 15217280 (-) True G60384
TU68298 lncRNA downstream 89305 15185264 ~ 15185484 (-) True G59996
TU68270 lncRNA downstream 111304 15163280 ~ 15163485 (-) True G59974
TU68258 lncRNA downstream 121889 15151602 ~ 15152900 (-) False G59963
TU68259 lncRNA downstream 121889 15151602 ~ 15152900 (-) True G59963
TU68775 lncRNA upstream 9632 15284744 ~ 15284980 (-) True G60422
TU68779 lncRNA upstream 13066 15288178 ~ 15288394 (-) True G60426
TU68783 lncRNA upstream 17335 15292447 ~ 15292685 (-) True G60430
TU68723 lncRNA upstream 36419 15311531 ~ 15320285 (-) True G60370
TU68731 lncRNA upstream 228294 15503406 ~ 15510352 (-) True CI01000009_15504401_15585060
CI01000009_15229965_15235247.mRNA mRNA downstream 39261 15229657 ~ 15235528 (-) True CI01000009_15229965_15235247
CI01000009_14974529_14974816.mRNA mRNA downstream 299369 14974042 ~ 14975420 (-) True CI01000009_14974529_14974816
CI01000009_14961220_14973307.mRNA mRNA downstream 301384 14960980 ~ 14973405 (-) True CI01000009_14961220_14973307
CI01000009_14905408_14907785.mRNA mRNA downstream 366712 14904489 ~ 14908077 (-) True CI01000009_14905408_14907785
CI01000009_14776978_14779978.mRNA mRNA downstream 492836 14776859 ~ 14781953 (-) True CI01000009_14776978_14779978
CI01000009_15301177_15304489.mRNA mRNA upstream 25985 15301097 ~ 15304500 (-) True CI01000009_15301177_15304489
CI01000009_15318811_15390382.mRNA mRNA upstream 43699 15318811 ~ 15390382 (-) False CI01000009_15318811_15390382
CI01000009_15483720_15484321.mRNA mRNA upstream 208597 15483709 ~ 15484321 (-) True CI01000009_15483720_15484321
CI01000009_15504401_15585060.mRNA mRNA upstream 229234 15504346 ~ 15585829 (-) False CI01000009_15504401_15585060
CI01000009_15654061_15662554.mRNA mRNA upstream 378648 15653760 ~ 15663026 (-) False CI01000009_15654061_15662554
TU68236 other downstream 142286 15132104 ~ 15132503 (-) True G59941
TU68092 other downstream 387325 14862397 ~ 14887464 (-) True G59811
TU67748 other downstream 1236916 14033564 ~ 14037873 (-) True G59490
TU67750 other downstream 1296175 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67287 other downstream 2985812 12288217 ~ 12288977 (-) True G59097
TU68714 other upstream 101148 15376260 ~ 15443047 (-) True G60362
TU68711 other upstream 371663 15646775 ~ 15651888 (-) True G60359

Expression Profile