RNA id: TU68779


Basic Information

Item Value
RNA id TU68779
length 217
lncRNA type inter_gene
GC content 0.38
exon number 1
gene id G60426
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15288178 ~ 15288394 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TAAGAATTGCTTGTATTGATGTCTTGAAGATGTATTCATGAGTGAACTGCATGAAATGCAGGGTTCATTCAAAGGGCCTCGGAGTGTTTATTAATCCACATCTGGGCTTGTCATTAAGGCAGCATCAGAATAACAAGGTTAGCGAAAGGGAACAGTACATCAATGATAAGTACATCAAAGATAACTATACACAGCAGTGCGTTAGTGCAAGTTTTTT

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68775 lncRNA downstream 3198 15284744 ~ 15284980 (-) True G60422
TU68771 lncRNA downstream 13066 15274789 ~ 15275112 (-) True G60418
TU68737 lncRNA downstream 70898 15217079 ~ 15217280 (-) True G60384
TU68298 lncRNA downstream 102694 15185264 ~ 15185484 (-) True G59996
TU68270 lncRNA downstream 124693 15163280 ~ 15163485 (-) True G59974
TU68783 lncRNA upstream 4053 15292447 ~ 15292685 (-) True G60430
TU68723 lncRNA upstream 23137 15311531 ~ 15320285 (-) True G60370
TU68731 lncRNA upstream 215012 15503406 ~ 15510352 (-) True CI01000009_15504401_15585060
TU68790 lncRNA upstream 259767 15548161 ~ 15548460 (-) True G60437
TU68792 lncRNA upstream 261188 15549582 ~ 15549879 (-) True G60439
CI01000009_15229965_15235247.mRNA mRNA downstream 52650 15229657 ~ 15235528 (-) True CI01000009_15229965_15235247
CI01000009_14974529_14974816.mRNA mRNA downstream 312758 14974042 ~ 14975420 (-) True CI01000009_14974529_14974816
CI01000009_14961220_14973307.mRNA mRNA downstream 314773 14960980 ~ 14973405 (-) True CI01000009_14961220_14973307
CI01000009_14905408_14907785.mRNA mRNA downstream 380101 14904489 ~ 14908077 (-) True CI01000009_14905408_14907785
CI01000009_14776978_14779978.mRNA mRNA downstream 506225 14776859 ~ 14781953 (-) True CI01000009_14776978_14779978
CI01000009_15301177_15304489.mRNA mRNA upstream 12703 15301097 ~ 15304500 (-) True CI01000009_15301177_15304489
CI01000009_15318811_15390382.mRNA mRNA upstream 30417 15318811 ~ 15390382 (-) False CI01000009_15318811_15390382
CI01000009_15483720_15484321.mRNA mRNA upstream 195315 15483709 ~ 15484321 (-) True CI01000009_15483720_15484321
CI01000009_15504401_15585060.mRNA mRNA upstream 215952 15504346 ~ 15585829 (-) False CI01000009_15504401_15585060
CI01000009_15654061_15662554.mRNA mRNA upstream 365366 15653760 ~ 15663026 (-) False CI01000009_15654061_15662554
TU68236 other downstream 155675 15132104 ~ 15132503 (-) True G59941
TU68092 other downstream 400714 14862397 ~ 14887464 (-) True G59811
TU67748 other downstream 1250305 14033564 ~ 14037873 (-) True G59490
TU67750 other downstream 1309564 13975388 ~ 13978614 (-) True CI01000009_13975122_13976026
TU67287 other downstream 2999201 12288217 ~ 12288977 (-) True G59097
TU68714 other upstream 87866 15376260 ~ 15443047 (-) True G60362
TU68711 other upstream 358381 15646775 ~ 15651888 (-) True G60359

Expression Profile