RNA id: TU68830


Basic Information

Item Value
RNA id TU68830
length 221
lncRNA type intronic
GC content 0.30
exon number 2
gene id G60469
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15718562 ~ 15719161 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

NNNNNTTCTGACTTTATATCTCACAATTCTGACTTTATATCTCACAATTCTGACTTTATATCTCACAATTCTGACTTTATATCACGCAATTCTGACTTTATATCACGCAATTCTGACTTTATAACTCGCAATTCTGACTTTATATCTCACAATTCTGACTTTATATCTCGCAATTGTGACTTTATATCTCACAATTCTGACTTTATAACTCGCAATTCTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68828 lncRNA downstream 6415 15708004 ~ 15712147 (-) True G60468
TU68712 lncRNA downstream 55867 15662417 ~ 15662695 (-) True CI01000009_15654061_15662554
TU68795 lncRNA downstream 69185 15589657 ~ 15649377 (-) True G60442
TU68792 lncRNA downstream 168683 15549582 ~ 15549879 (-) True G60439
TU68790 lncRNA downstream 170102 15548161 ~ 15548460 (-) True G60437
TU68729 lncRNA upstream 26307 15745468 ~ 15746486 (-) True G60376
TU68833 lncRNA upstream 31537 15750698 ~ 15750994 (-) True G60472
TU68720 lncRNA upstream 62138 15781299 ~ 15798959 (-) True G60367
TU68840 lncRNA upstream 83726 15802887 ~ 15803791 (-) True G60479
CI01000009_15693066_15694538.mRNA mRNA downstream 23933 15692994 ~ 15694629 (-) True CI01000009_15693066_15694538
CI01000009_15654061_15662554.mRNA mRNA downstream 55536 15653760 ~ 15663026 (-) False CI01000009_15654061_15662554
CI01000009_15504401_15585060.mRNA mRNA downstream 132733 15504346 ~ 15585829 (-) False CI01000009_15504401_15585060
CI01000009_15483720_15484321.mRNA mRNA downstream 234241 15483709 ~ 15484321 (-) True CI01000009_15483720_15484321
CI01000009_15318811_15390382.mRNA mRNA downstream 328180 15318811 ~ 15390382 (-) False CI01000009_15318811_15390382
CI01000009_15726357_15736168.mRNA mRNA upstream 6984 15726145 ~ 15736168 (-) True CI01000009_15726357_15736168
CI01000009_15784118_15789896.mRNA mRNA upstream 64919 15784080 ~ 15789896 (-) True CI01000009_15784118_15789896
CI01000009_15791178_15798430.mRNA mRNA upstream 71688 15790849 ~ 15798430 (-) True CI01000009_15791178_15798430
CI01000009_15802365_15836680.mRNA mRNA upstream 83187 15802348 ~ 15836684 (-) True CI01000009_15802365_15836680
CI01000009_15847186_15853675.mRNA mRNA upstream 127757 15846918 ~ 15853675 (-) True CI01000009_15847186_15853675
TU68711 other downstream 62593 15646775 ~ 15651888 (-) True G60359
TU68714 other downstream 275515 15376260 ~ 15443047 (-) True G60362
TU68236 other downstream 586059 15132104 ~ 15132503 (-) True G59941
TU68092 other downstream 831098 14862397 ~ 14887464 (-) True G59811
TU67748 other downstream 1680689 14033564 ~ 14037873 (-) True G59490

Expression Profile