RNA id: TU68833


Basic Information

Item Value
RNA id TU68833
length 297
lncRNA type inter_gene
GC content 0.28
exon number 1
gene id G60472
representative True

Chromosome Information

Item Value
chromosome id CI01000009
NCBI id null
chromosome length 16003125
location 15750698 ~ 15750994 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTAAAAATAATTCCGTAGTTTTTACAAAATAATTTCGGCAGCTGCAGTTGCCAGAATAATTTTGTAAAAAATACAAAAAAACTGTAAACACATTTACAGAACAAACTGTAAATTTTACAGTATAAAACTGTAATTTACAAACAAGAAAATTTGAATGTAAACCAATAAATTCAATGCAATAAAACAATGCACACTACTATTAAAATCTGTTTTGTAACTTTAACATATACTGACAACCACCATTATAATGCAGGTGGTAAATGACAAAGCCACATGAAGAATCAGAGTTCATCACA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU68729 lncRNA downstream 4212 15745468 ~ 15746486 (-) True G60376
TU68830 lncRNA downstream 31537 15718562 ~ 15719161 (-) True G60469
TU68828 lncRNA downstream 38551 15708004 ~ 15712147 (-) True G60468
TU68712 lncRNA downstream 88003 15662417 ~ 15662695 (-) True CI01000009_15654061_15662554
TU68795 lncRNA downstream 101321 15589657 ~ 15649377 (-) True G60442
TU68720 lncRNA upstream 30305 15781299 ~ 15798959 (-) True G60367
TU68840 lncRNA upstream 51893 15802887 ~ 15803791 (-) True G60479
CI01000009_15726357_15736168.mRNA mRNA downstream 14530 15726145 ~ 15736168 (-) True CI01000009_15726357_15736168
CI01000009_15716557_15721525.mRNA mRNA downstream 29102 15716477 ~ 15721596 (-) True CI01000009_15716557_15721525
CI01000009_15693066_15694538.mRNA mRNA downstream 56069 15692994 ~ 15694629 (-) True CI01000009_15693066_15694538
CI01000009_15654061_15662554.mRNA mRNA downstream 87672 15653760 ~ 15663026 (-) False CI01000009_15654061_15662554
CI01000009_15504401_15585060.mRNA mRNA downstream 164869 15504346 ~ 15585829 (-) False CI01000009_15504401_15585060
CI01000009_15784118_15789896.mRNA mRNA upstream 33086 15784080 ~ 15789896 (-) True CI01000009_15784118_15789896
CI01000009_15791178_15798430.mRNA mRNA upstream 39855 15790849 ~ 15798430 (-) True CI01000009_15791178_15798430
CI01000009_15802365_15836680.mRNA mRNA upstream 51354 15802348 ~ 15836684 (-) True CI01000009_15802365_15836680
CI01000009_15847186_15853675.mRNA mRNA upstream 95924 15846918 ~ 15853675 (-) True CI01000009_15847186_15853675
CI01000009_15975897_15978506.mRNA mRNA upstream 224736 15975730 ~ 15978506 (-) True CI01000009_15975897_15978506
TU68711 other downstream 94729 15646775 ~ 15651888 (-) True G60359
TU68714 other downstream 307651 15376260 ~ 15443047 (-) True G60362
TU68236 other downstream 618195 15132104 ~ 15132503 (-) True G59941
TU68092 other downstream 863234 14862397 ~ 14887464 (-) True G59811
TU67748 other downstream 1712825 14033564 ~ 14037873 (-) True G59490

Expression Profile