RNA id: TU69101


Basic Information

Item Value
RNA id TU69101
length 204
lncRNA type inter_gene
GC content 0.37
exon number 1
gene id G60707
representative True

Chromosome Information

Item Value
chromosome id CI01000010
NCBI id null
chromosome length 12265998
location 306189 ~ 306392 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

GCAGTATTCTTGTTATCAGTTTACTCGAAAATTATGCCATAACAAATGTGTAACGTTCTTGCTGCAAACCACAGTTCATCCTTCTGAATCAGAACTTCTGATCCACAGATGGGATCATTTTTAGACCAAGCAAATTTATATGATCATTATTTGCACCAGAAGCCCCAAAAGCAACAGGTAGGCTGCATTTACTAAGCAATAATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU69100 lncRNA upstream 2089 303848 ~ 304100 (+) True G60706
TU69099 lncRNA upstream 4937 300570 ~ 301252 (+) True G60705
TU69094 lncRNA upstream 10126 295854 ~ 296063 (+) True G60700
TU69056 lncRNA upstream 11427 294524 ~ 294762 (+) True G60665
TU69009 lncRNA upstream 113948 184827 ~ 192241 (+) True G60622
TU69058 lncRNA downstream 235426 541818 ~ 551336 (+) False G60667
TU69059 lncRNA downstream 235426 541818 ~ 551336 (+) True G60667
TU69152 lncRNA downstream 261211 567603 ~ 567932 (+) True G60745
TU69087 lncRNA downstream 290432 596824 ~ 597095 (+) True G60693
TU69199 lncRNA downstream 366674 673066 ~ 678107 (+) False G60780
CI01000010_00023093_00024037.mRNA mRNA upstream 281646 20332 ~ 24543 (+) True CI01000010_00023093_00024037
CI01000010_00322969_00326216.mRNA mRNA downstream 16577 322969 ~ 327175 (+) True CI01000010_00322969_00326216
CI01000010_00332125_00333333.mRNA mRNA downstream 25733 332125 ~ 333470 (+) True CI01000010_00332125_00333333
CI01000010_00357915_00361980.mRNA mRNA downstream 51523 357915 ~ 362086 (+) True CI01000010_00357915_00361980
CI01000010_00367694_00371294.mRNA mRNA downstream 59794 366186 ~ 371422 (+) True CI01000010_00367694_00371294
CI01000010_00379332_00382116.mRNA mRNA downstream 72940 379332 ~ 382311 (+) True CI01000010_00379332_00382116
TU69288 other downstream 514632 821024 ~ 838432 (+) True G60857
TU69285 other downstream 559422 865814 ~ 870598 (+) True G60854
TU69273 other downstream 638790 946794 ~ 946871 (+) True G60842
TU70029 other downstream 2887763 3194155 ~ 3199031 (+) True G61462
TU70047 other downstream 3007303 3328458 ~ 3331186 (+) True G61480

Expression Profile