RNA id: TU77788



Basic Information


Item Value
RNA id TU77788
length 550
RNA type TUCP
GC content 0.35
exon number 2
gene id G68282
representative True

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 26390 ~ 60532 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


GTCCCTGAGGAAAAATTCAATTCATTTACTGCTTTAGGAGAGGAAGAATTGTCTAAACTTGTTAAATCATCAAAATCAACAACATGTATGTTAGACCCTATACCGACTAAGCTATTGAAAGAAATGCTTCCAGAGGTCATAGACCCTCTTCTCAATATCGTCAATTCATCTTTATCATTAGGATACGTACCAAAAACTTTTAAGCTGGCTATTATTAAACCTCTTATTAAAAAACCACAACTTGATCCTAGAGAATTAGTCAATTACAGGCCGATCTCAAATCTCACTTTTCTGTCAAAAATACTAGAAAAGGCAGTATCATCACAGCTATGTTCCTTTTTAGAAAGAAATGGTATCTGTGAGGATTTCCAGTCAGGATTTAGACCGTACCATAGTACTGAGACTGCTCTCATTAGAGTTACTAATGATTTGCTCTTATCATCAGATCGTGGTTGTATCTCTCTATTGGTGTTACTGGATCTTAGTGCAGCATTTGACACTATTGATCACAATATTCTTTTAAATAGACTCGAAAATTATGTTGGCATTA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU77785 lncRNA upstream 1703 24481 ~ 24687 (+) True G68280
TU77783 lncRNA upstream 7296 18715 ~ 19094 (+) True G68278
TU77782 lncRNA upstream 10215 15937 ~ 16175 (+) True G68277
TU77839 lncRNA downstream 51179 111711 ~ 112212 (+) True G68330
TU77850 lncRNA downstream 70395 130927 ~ 135917 (+) True G68339
TU77837 lncRNA downstream 101067 161599 ~ 162061 (+) True G68329
TU77867 lncRNA downstream 115295 175827 ~ 176066 (+) True G68352
TU77868 lncRNA downstream 117955 178487 ~ 182202 (+) True G68353
CI01000012_00194370_00195347.mRNA mRNA downstream 133371 193903 ~ 195676 (+) False CI01000012_00194370_00195347
CI01000012_00318129_00318595.mRNA mRNA downstream 257597 318129 ~ 319418 (+) True CI01000012_00318129_00318595
CI01000012_00502185_00516358.mRNA mRNA downstream 439619 500151 ~ 516908 (+) True CI01000012_00502185_00516358
CI01000012_00593086_00594741.mRNA mRNA downstream 531594 592126 ~ 595465 (+) True CI01000012_00593086_00594741
CI01000012_00644021_00646785.mRNA mRNA downstream 583489 644021 ~ 647075 (+) True CI01000012_00644021_00646785
TU77769 other downstream 131714 192246 ~ 205774 (+) True G68264
TU78227 other downstream 475034 535566 ~ 535953 (+) True G68660
TU78303 other downstream 622991 683523 ~ 684578 (+) False G68725
TU78307 other downstream 622991 683523 ~ 684696 (+) False G68725
TU78309 other downstream 622991 683523 ~ 684856 (+) False G68725

Expression Profile