RNA id: TU84477


Basic Information

Item Value
RNA id TU84477
length 213
lncRNA type inter_gene
GC content 0.40
exon number 1
gene id G74063
representative True

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 6324358 ~ 6324570 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CAACTATTGAAATTCAACCCCAAAACTAGGGATGCACCGATCCGCCTTTTTCGCTTCCGATACCGATTCTGATACTTGGGATTCAGTATCGGCCGATACCAATCCGATATTCAAGTAATAATAAAAAAAAGTGCTAAATTACCTAATAAACTGTATGCCTCACTGTGTGGAAGAAACTATGATCATTCTTTTGTGCAAGGTATCAGGCTCGAC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU82923 lncRNA downstream 20295 6303741 ~ 6304063 (-) True G72707
TU82915 lncRNA downstream 26851 6297200 ~ 6297507 (-) True G72699
TU82901 lncRNA downstream 37573 6286361 ~ 6286785 (-) True G72687
TU82890 lncRNA downstream 57587 6266564 ~ 6266771 (-) True G72676
TU82889 lncRNA downstream 57972 6265922 ~ 6266386 (-) True G72675
TU84480 lncRNA upstream 3322 6327892 ~ 6328128 (-) True G74066
TU84636 lncRNA upstream 210307 6534877 ~ 6536637 (-) True G74215
TU84557 lncRNA upstream 445263 6769833 ~ 6858642 (-) True G74142
TU84664 lncRNA upstream 586454 6911024 ~ 6911324 (-) True CI01000012_06872835_06911259
TU84676 lncRNA upstream 690295 7014865 ~ 7020574 (-) True G74252
CI01000012_06147833_06153076.mRNA mRNA downstream 170155 6147695 ~ 6154203 (-) True CI01000012_06147833_06153076
CI01000012_05988471_06021245.mRNA mRNA downstream 302829 5986816 ~ 6021529 (-) True CI01000012_05988471_06021245
CI01000012_05932523_05940218.mRNA mRNA downstream 384140 5932489 ~ 5940218 (-) True CI01000012_05932523_05940218
CI01000012_05897865_05906600.mRNA mRNA downstream 417758 5897734 ~ 5906600 (-) True CI01000012_05897865_05906600
CI01000012_05889930_05893764.mRNA mRNA downstream 430594 5889930 ~ 5893764 (-) True CI01000012_05889930_05893764
CI01000012_06406744_06433128.mRNA mRNA upstream 82174 6406744 ~ 6433128 (-) True CI01000012_06406744_06433128
CI01000012_06496870_06580459.mRNA mRNA upstream 171573 6496143 ~ 6580919 (-) True CI01000012_06496870_06580459
CI01000012_06597401_06599198.mRNA mRNA upstream 272718 6597288 ~ 6600700 (-) True CI01000012_06597401_06599198
CI01000012_06694889_06695185.mRNA mRNA upstream 370217 6694787 ~ 6695223 (-) True CI01000012_06694889_06695185
CI01000012_06713565_06749032.mRNA mRNA upstream 388886 6713456 ~ 6749070 (-) True CI01000012_06713565_06749032
TU82841 other downstream 176864 6147011 ~ 6147494 (-) True G72629
TU82465 other downstream 858501 5462840 ~ 5465857 (-) True G72294
TU82391 other downstream 907578 5363642 ~ 5364083 (-) False G72235
TU82393 other downstream 907578 5363642 ~ 5364079 (-) True G72235
TU82349 other downstream 1022152 5293773 ~ 5302206 (-) True G72204
TU84502 other upstream 1030682 7355252 ~ 7355377 (-) True G74087
TU85146 other upstream 1939759 8264329 ~ 8265654 (-) True G74648
TU85219 other upstream 2042449 8367019 ~ 8367627 (-) False G74701
TU85218 other upstream 2042511 8367081 ~ 8367627 (-) False G74701
TU85225 other upstream 2042511 8367081 ~ 8367643 (-) True G74701

Expression Profile