RNA id: TU84124



Basic Information


Item Value
RNA id TU84124
length 319
lncRNA type antisense_over
GC content 0.50
exon number 1
gene id G73744
representative False

Chromosome Information


Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 8748642 ~ 8749055 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


TCTTGATGACCTTAATGTGGAAATAGCCAAGCATCTGGTAGTTATCCAGGAAGAGCTGGTAACGGCTGGTTTCTTTGGGAACATCAAGCTTTTCGGGCCAGTACTTGTGGCATTTTACCCGGCCACGTTCCACCTCCTGAGTCATCATGGCGATAACATCAGACTTGTTCTCCCATACCATCTGCCAGAAGTTATCCTGAGTGCCAGGCAAAGGGCCCTGAGCGGAGATGTAGAAGAGCTCCTCTGTGCCCACCTTCATACGAATGTAGCTGGCATTGATGTAGCCCTCATTCTCTCCGACAGGAACACGTGTCTTATC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU84121 lncRNA upstream 2050 8745137 ~ 8746687 (+) False G73743
TU84122 lncRNA upstream 2143 8745137 ~ 8746594 (+) True G73743
TU84119 lncRNA upstream 2260 8745137 ~ 8746477 (+) False G73743
TU84062 lncRNA upstream 48229 8700211 ~ 8700508 (+) True G73701
TU84047 lncRNA upstream 97287 8651209 ~ 8651450 (+) True G73686
TU84133 lncRNA downstream 7067 8756122 ~ 8756791 (+) True G73750
TU84135 lncRNA downstream 10516 8759571 ~ 8759914 (+) True G73752
TU84136 lncRNA downstream 11284 8760339 ~ 8760560 (+) True G73753
TU84137 lncRNA downstream 13287 8762342 ~ 8762631 (+) True G73754
TU84138 lncRNA downstream 14283 8763338 ~ 8763746 (+) True G73755
CI01000012_08706061_08708565.mRNA mRNA upstream 39481 8705916 ~ 8709256 (+) True CI01000012_08706061_08708565
CI01000012_08656797_08670009.mRNA mRNA upstream 78495 8656323 ~ 8670242 (+) True CI01000012_08656797_08670009
CI01000012_08643992_08646512.mRNA mRNA upstream 102195 8643992 ~ 8646542 (+) True CI01000012_08643992_08646512
CI01000012_08635778_08639992.mRNA mRNA upstream 108169 8635778 ~ 8640568 (+) True CI01000012_08635778_08639992
CI01000012_08629488_08631884.mRNA mRNA upstream 116738 8629218 ~ 8631999 (+) True CI01000012_08629488_08631884
CI01000012_08787836_08798682.mRNA mRNA downstream 38781 8787836 ~ 8798682 (+) True CI01000012_08787836_08798682
CI01000012_08852654_08899169.mRNA mRNA downstream 103599 8852654 ~ 8899169 (+) True CI01000012_08852654_08899169
CI01000012_08926039_08935452.mRNA mRNA downstream 175993 8925048 ~ 8935861 (+) True CI01000012_08926039_08935452
CI01000012_09059209_09062816.mRNA mRNA downstream 310154 9059209 ~ 9062938 (+) True CI01000012_09059209_09062816
CI01000012_09074304_09074584.mRNA mRNA downstream 324491 9073546 ~ 9074642 (+) True CI01000012_09074304_09074584
TU83914 other upstream 381110 8366806 ~ 8367627 (+) False G73578
TU83912 other upstream 381110 8367004 ~ 8367627 (+) False G73578
TU83911 other upstream 381110 8367077 ~ 8367627 (+) True G73578
TU83614 other upstream 940882 7806103 ~ 7807855 (+) True CI01000012_07806089_07811902
TU81687 other upstream 2824432 5923166 ~ 5924305 (+) True CI01000012_05923216_05928055
TU85876 other downstream 1472900 10221955 ~ 10222037 (+) True G75291
TU86153 other downstream 2395762 11144817 ~ 11145739 (+) True G75533
TU87145 other downstream 3881700 12630755 ~ 12675666 (+) True G76385
TU87131 other downstream 3996476 12745531 ~ 12749169 (+) False G76374
TU87240 other downstream 4266451 13015506 ~ 13023794 (+) True G76462

Expression Profile