RNA id: TU86326


Basic Information

Item Value
RNA id TU86326
length 218
lncRNA type inter_gene
GC content 0.44
exon number 1
gene id G75647
representative True

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 10089056 ~ 10089273 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

TGTAAGAAATATCCATATATAAAACTTTATAAATTCGAATAACGAGCTTCCGGTGGACGACCGCACGCAGAATGCGCAAGTTGACTTGCGCCAAATGAGTAATCCTCTGACGCGATGTATGACGCTGGATGTAGGAGTATCGTAAGCTTCTCACGGTTCAAACAAAAATGGCTGGGCAACAAACTCAAGCTCCTCTTCTCTTCTATCGAAATCCTCCG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86325 lncRNA downstream 2544 10086275 ~ 10086512 (-) True G75646
TU86324 lncRNA downstream 2795 10085951 ~ 10086261 (-) True G75645
TU85809 lncRNA downstream 101371 9987365 ~ 9987685 (-) True G75230
TU85789 lncRNA downstream 272020 9815978 ~ 9817036 (-) True G75212
TU85765 lncRNA downstream 319547 9766445 ~ 9769509 (-) True G75189
TU86327 lncRNA upstream 732 10090005 ~ 10090218 (-) True G75648
TU86309 lncRNA upstream 89856 10179129 ~ 10179830 (-) True G75630
TU86340 lncRNA upstream 163847 10253120 ~ 10253362 (-) True G75661
TU86232 lncRNA upstream 204573 10293846 ~ 10295724 (-) False G75597
TU86230 lncRNA upstream 204886 10294159 ~ 10295667 (-) False G75597
CI01000012_09984871_10009730.mRNA mRNA downstream 79171 9984306 ~ 10009885 (-) True CI01000012_09984871_10009730
CI01000012_09976030_09976302.mRNA mRNA downstream 112689 9975571 ~ 9976367 (-) True CI01000012_09976030_09976302
CI01000012_09974294_09974754.mRNA mRNA downstream 114000 9973339 ~ 9975056 (-) True CI01000012_09974294_09974754
CI01000012_09926268_09941904.mRNA mRNA downstream 146662 9926073 ~ 9942394 (-) True CI01000012_09926268_09941904
CI01000012_09894361_09922003.mRNA mRNA downstream 166613 9893656 ~ 9922443 (-) True CI01000012_09894361_09922003
CI01000012_10114837_10117992.mRNA mRNA upstream 25123 10114396 ~ 10119291 (-) True CI01000012_10114837_10117992
CI01000012_10119912_10169990.mRNA mRNA upstream 30639 10119912 ~ 10169990 (-) True CI01000012_10119912_10169990
CI01000012_10189922_10194006.mRNA mRNA upstream 100603 10189876 ~ 10194006 (-) True CI01000012_10189922_10194006
CI01000012_10201667_10213604.mRNA mRNA upstream 112124 10201397 ~ 10213604 (-) True CI01000012_10201667_10213604
CI01000012_10217709_10222035.mRNA mRNA upstream 127935 10217208 ~ 10222035 (-) True CI01000012_10217709_10222035
TU85530 other downstream 513084 9575648 ~ 9575972 (-) False G74982
TU85525 other downstream 513132 9575648 ~ 9575924 (-) False G74982
TU85327 other downstream 687088 9398076 ~ 9401968 (-) True CI01000012_09400481_09401810
TU85337 other downstream 1005567 9082736 ~ 9083489 (-) True CI01000012_09082056_09083285
TU85325 other downstream 1015599 9071371 ~ 9073457 (-) True CI01000012_09071892_09073410
TU86281 other upstream 522642 10611915 ~ 10620871 (-) False G75608
TU86282 other upstream 522642 10611915 ~ 10620871 (-) True G75608
TU87807 other upstream 1959771 12049044 ~ 12049222 (-) True G76984
TU87842 other upstream 1989663 12080546 ~ 12080752 (-) False G77017
TU87843 other upstream 1989663 12080546 ~ 12083845 (-) True G77017

Expression Profile