RNA id: TU86881


Basic Information

Item Value
RNA id TU86881
length 208
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G76152
representative True

Chromosome Information

Item Value
chromosome id CI01000012
NCBI id null
chromosome length 13770000
location 11794011 ~ 11794218 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence

CATTTCTAATAACTCTGGGAGCCTGACAGCCTGCCGTTAAAGAAAGTGAGACAGAGAGAGAGAGAGTGAGAGAAGAATAACATGTTAGATATGGCTCACTGGAATGAGGATAAAATGACACTTGACCAATTGACCCCACAAACCTTTGAGCAGGCCTGTCAGGGTCAAAGGTTGAGCTTGGTGTGATGTCTGAGTGCTAATCTAGTCC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU86880 lncRNA upstream 1862 11791948 ~ 11792149 (+) True G76151
TU86879 lncRNA upstream 2369 11791343 ~ 11791642 (+) True G76150
TU86877 lncRNA upstream 5102 11788691 ~ 11788909 (+) True G76148
TU86875 lncRNA upstream 6626 11787039 ~ 11787385 (+) True G76146
TU86872 lncRNA upstream 8320 11785480 ~ 11785691 (+) True G76143
TU86910 lncRNA downstream 45837 11840055 ~ 11841811 (+) True G76181
TU87010 lncRNA downstream 101781 11895999 ~ 11896199 (+) True G76261
TU86938 lncRNA downstream 126041 11920259 ~ 11925488 (+) False G76198
TU86939 lncRNA downstream 126041 11920259 ~ 11925517 (+) True G76198
TU86996 lncRNA downstream 170306 11964524 ~ 11965309 (+) True G76247
CI01000012_11698150_11702986.mRNA mRNA upstream 90798 11697115 ~ 11703213 (+) True CI01000012_11698150_11702986
CI01000012_11616967_11694276.mRNA mRNA upstream 99727 11615547 ~ 11694284 (+) False CI01000012_11616967_11694276
CI01000012_11319849_11326035.mRNA mRNA upstream 467107 11319060 ~ 11326904 (+) True CI01000012_11319849_11326035
CI01000012_11277561_11292490.mRNA mRNA upstream 501375 11277561 ~ 11292636 (+) True CI01000012_11277561_11292490
CI01000012_11091957_11093675.mRNA mRNA upstream 700237 11091957 ~ 11093774 (+) True CI01000012_11091957_11093675
CI01000012_11859839_11869022.mRNA mRNA downstream 65531 11859749 ~ 11870657 (+) True CI01000012_11859839_11869022
CI01000012_11874504_11884601.mRNA mRNA downstream 80286 11874504 ~ 11885292 (+) True CI01000012_11874504_11884601
CI01000012_11897443_11903607.mRNA mRNA downstream 103225 11897443 ~ 11903607 (+) True CI01000012_11897443_11903607
CI01000012_11913513_11921468.mRNA mRNA downstream 119295 11913513 ~ 11921935 (+) True CI01000012_11913513_11921468
CI01000012_11932267_11962143.mRNA mRNA downstream 138049 11932267 ~ 11962208 (+) True CI01000012_11932267_11962143
TU86153 other upstream 648272 11144817 ~ 11145739 (+) True G75533
TU85876 other upstream 1569724 10221955 ~ 10222037 (+) True G75291
TU83914 other upstream 3426384 8366806 ~ 8367627 (+) False G73578
TU87145 other downstream 836537 12630755 ~ 12675666 (+) True G76385
TU87131 other downstream 951313 12745531 ~ 12749169 (+) False G76374
TU87240 other downstream 1221288 13015506 ~ 13023794 (+) True G76462
TU87436 other downstream 1857641 13651859 ~ 13652234 (+) True G76645
TU87448 other downstream 1909269 13703487 ~ 13718704 (+) False G76656

Expression Profile