RNA id: CI01000013_04760068_04760352.mRNA



Basic Information


Item Value
RNA id CI01000013_04760068_04760352.mRNA
length 368
RNA type mRNA
GC content 0.45
exon number 1
gene id CI01000013_04760068_04760352
representative True

Chromosome Information


Item Value
chromosome id CI01000013
NCBI id null
chromosome length 12551977
location 4760007 ~ 4760374 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome
species grasscarp
(Ctenopharyngodon idella)

Sequence


CTTTAAATGTGATACATTAAGTTATAGTTCAGAACGCTTCGAATGACAGGATTGTATCCTCATGGATGTGAGTGAAAACCACAGGTGTGCTCAGATGGACACGGGGCATATAATGATTCGATCCTCTAACATGACACTGAGCACCAGGAACACAAAGTACAGGATGAACATGGTGAATCCCAACACTTTATTCATCCTCCACTTACAGGCAGCGATGGAGATAATGACGAAGAGGAGCATGAGGAAGAGCAGCACAATGGCACAGAACAGCCCATTACTGCTCACAGTCACTGGGGCAAACGAATGGCAGAACGAGAACATCAACCATGGCACTGGCAGCCTGTAACAGTGAAAGATATAATTAAGCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU92057 lncRNA upstream 41710 4718083 ~ 4718297 (+) True G80875
TU92013 lncRNA upstream 47478 4709807 ~ 4712529 (+) True G80834
TU92004 lncRNA upstream 182094 4577531 ~ 4577913 (+) True G80826
TU92010 lncRNA upstream 186675 4572802 ~ 4573332 (+) True G80832
TU92009 lncRNA upstream 187907 4571764 ~ 4572100 (+) True G80831
TU92062 lncRNA downstream 9936 4770310 ~ 4770538 (+) True G80879
TU92024 lncRNA downstream 56096 4816470 ~ 4818947 (+) True G80842
TU92032 lncRNA downstream 65944 4826318 ~ 4828164 (+) True G80850
TU92076 lncRNA downstream 89065 4849439 ~ 4849797 (+) True G80893
TU92102 lncRNA downstream 158609 4918983 ~ 4919289 (+) True G80919
CI01000013_04750261_04754885.mRNA mRNA upstream 3962 4750261 ~ 4756045 (+) True CI01000013_04750261_04754885
CI01000013_04720501_04724747.mRNA mRNA upstream 35067 4720501 ~ 4724940 (+) True CI01000013_04720501_04724747
CI01000013_04673313_04707104.mRNA mRNA upstream 52537 4673216 ~ 4707470 (+) True CI01000013_04673313_04707104
CI01000013_04657029_04672057.mRNA mRNA upstream 87265 4656803 ~ 4672742 (+) True CI01000013_04657029_04672057
CI01000013_04612468_04618550.mRNA mRNA upstream 141007 4612054 ~ 4619000 (+) True CI01000013_04612468_04618550
CI01000013_04774039_04780331.mRNA mRNA downstream 13665 4774039 ~ 4780762 (+) True CI01000013_04774039_04780331
CI01000013_04788303_04790895.mRNA mRNA downstream 27929 4788303 ~ 4791025 (+) True CI01000013_04788303_04790895
CI01000013_04805165_04810980.mRNA mRNA downstream 44105 4804479 ~ 4810980 (+) True CI01000013_04805165_04810980
CI01000013_04837614_04840771.mRNA mRNA downstream 77240 4837614 ~ 4841571 (+) True CI01000013_04837614_04840771
CI01000013_04854576_04864881.mRNA mRNA downstream 94202 4854576 ~ 4865227 (+) True CI01000013_04854576_04864881
TU91262 other upstream 694178 4064933 ~ 4065829 (+) True CI01000013_04051081_04064651
TU91155 other upstream 1175223 3584008 ~ 3584784 (+) True G80062
TU90328 other upstream 2292836 2466765 ~ 2467171 (+) True G79309
TU88574 other upstream 3807038 946521 ~ 952969 (+) True G77695
TU88411 other upstream 4050458 708833 ~ 709549 (+) True G77533
TU92027 other downstream 74704 4835078 ~ 4836232 (+) True G80845
TU92951 other downstream 1295924 6056662 ~ 6056782 (+) True G81681
TU92936 other downstream 1318188 6079666 ~ 6082367 (+) True G81666
TU93312 other downstream 2575571 7335945 ~ 7338239 (+) True G81994
TU93521 other downstream 3267964 8028338 ~ 8041343 (+) True G82168

Expression Profile